Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
CCHCR1Q8TD31 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.84■■□□□ 1.89
CCHCR1Q8TD31 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CCHCR1Q8TD31 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CCHCR1Q8TD31 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CCHCR1Q8TD31 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
CCHCR1Q8TD31 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.84■■□□□ 1.89
CCHCR1Q8TD31 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
CCHCR1Q8TD31 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CCHCR1Q8TD31 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CCHCR1Q8TD31 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CCHCR1Q8TD31 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
CCHCR1Q8TD31 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
CCHCR1Q8TD31 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
CCHCR1Q8TD31 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.82■■□□□ 1.88
CCHCR1Q8TD31 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.82■■□□□ 1.88
CCHCR1Q8TD31 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.81■■□□□ 1.88
CCHCR1Q8TD31 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CCHCR1Q8TD31 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.8■■□□□ 1.88
CCHCR1Q8TD31 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CCHCR1Q8TD31 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CCHCR1Q8TD31 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.8■■□□□ 1.88
CCHCR1Q8TD31 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CCHCR1Q8TD31 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
CCHCR1Q8TD31 MIR762-201ENST00000390236 83 ntBASIC26.79■■□□□ 1.88
CCHCR1Q8TD31 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CCHCR1Q8TD31 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCHCR1Q8TD31 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCHCR1Q8TD31 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.78■■□□□ 1.88
CCHCR1Q8TD31 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CCHCR1Q8TD31 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CCHCR1Q8TD31 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCHCR1Q8TD31 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.75■■□□□ 1.87
CCHCR1Q8TD31 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCHCR1Q8TD31 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCHCR1Q8TD31 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCHCR1Q8TD31 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCHCR1Q8TD31 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CCHCR1Q8TD31 AP006261.1-201ENST00000584783 668 ntBASIC26.72■■□□□ 1.87
CCHCR1Q8TD31 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCHCR1Q8TD31 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.71■■□□□ 1.87
CCHCR1Q8TD31 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
CCHCR1Q8TD31 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
CCHCR1Q8TD31 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CCHCR1Q8TD31 AP004833.2-201ENST00000532228 1454 ntBASIC26.69■■□□□ 1.86
CCHCR1Q8TD31 AC005559.1-201ENST00000589661 871 ntBASIC26.69■■□□□ 1.86
CCHCR1Q8TD31 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.68■■□□□ 1.86
CCHCR1Q8TD31 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCHCR1Q8TD31 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.67■■□□□ 1.86
CCHCR1Q8TD31 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.67■■□□□ 1.86
CCHCR1Q8TD31 MIR3665-201ENST00000578708 105 ntBASIC26.67■■□□□ 1.86
CCHCR1Q8TD31 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCHCR1Q8TD31 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.67■■□□□ 1.86
CCHCR1Q8TD31 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CCHCR1Q8TD31 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.66■■□□□ 1.86
CCHCR1Q8TD31 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.66■■□□□ 1.86
CCHCR1Q8TD31 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.66■■□□□ 1.86
CCHCR1Q8TD31 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.65■■□□□ 1.86
CCHCR1Q8TD31 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
CCHCR1Q8TD31 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CCHCR1Q8TD31 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.64■■□□□ 1.86
CCHCR1Q8TD31 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
CCHCR1Q8TD31 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.64■■□□□ 1.85
CCHCR1Q8TD31 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCHCR1Q8TD31 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CCHCR1Q8TD31 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.63■■□□□ 1.85
CCHCR1Q8TD31 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCHCR1Q8TD31 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.62■■□□□ 1.85
CCHCR1Q8TD31 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCHCR1Q8TD31 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCHCR1Q8TD31 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCHCR1Q8TD31 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCHCR1Q8TD31 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
CCHCR1Q8TD31 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCHCR1Q8TD31 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCHCR1Q8TD31 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCHCR1Q8TD31 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCHCR1Q8TD31 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCHCR1Q8TD31 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.6■■□□□ 1.85
CCHCR1Q8TD31 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CCHCR1Q8TD31 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCHCR1Q8TD31 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.6■■□□□ 1.85
CCHCR1Q8TD31 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CCHCR1Q8TD31 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCHCR1Q8TD31 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCHCR1Q8TD31 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCHCR1Q8TD31 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
CCHCR1Q8TD31 AL162393.1-201ENST00000437852 946 ntBASIC26.58■■□□□ 1.85
CCHCR1Q8TD31 DUX4L28-201ENST00000623687 678 ntBASIC26.58■■□□□ 1.85
CCHCR1Q8TD31 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCHCR1Q8TD31 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CCHCR1Q8TD31 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CCHCR1Q8TD31 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.58■■□□□ 1.85
CCHCR1Q8TD31 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCHCR1Q8TD31 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCHCR1Q8TD31 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
CCHCR1Q8TD31 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CCHCR1Q8TD31 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
CCHCR1Q8TD31 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.56■■□□□ 1.84
CCHCR1Q8TD31 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms