Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF439Q8NDP4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
ZNF439Q8NDP4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF439Q8NDP4 AC005559.1-201ENST00000589661 871 ntBASIC21.34■■□□□ 1.01
ZNF439Q8NDP4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF439Q8NDP4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF439Q8NDP4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF439Q8NDP4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF439Q8NDP4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.33■■□□□ 1.01
ZNF439Q8NDP4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.33■■□□□ 1.01
ZNF439Q8NDP4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.33■■□□□ 1.01
ZNF439Q8NDP4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ZNF439Q8NDP4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
ZNF439Q8NDP4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
ZNF439Q8NDP4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZNF439Q8NDP4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF439Q8NDP4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.3■■□□□ 1
ZNF439Q8NDP4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZNF439Q8NDP4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF439Q8NDP4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.29■■□□□ 1
ZNF439Q8NDP4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF439Q8NDP4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF439Q8NDP4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.28■■□□□ 1
ZNF439Q8NDP4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.28■■□□□ 1
ZNF439Q8NDP4 AC127502.1-201ENST00000399971 1502 ntBASIC21.28■■□□□ 1
ZNF439Q8NDP4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZNF439Q8NDP4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.27■■□□□ 1
ZNF439Q8NDP4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.27■■□□□ 1
ZNF439Q8NDP4 DUX4L28-201ENST00000623687 678 ntBASIC21.27■■□□□ 1
ZNF439Q8NDP4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZNF439Q8NDP4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.26■□□□□ 0.99
ZNF439Q8NDP4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF439Q8NDP4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ZNF439Q8NDP4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF439Q8NDP4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF439Q8NDP4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF439Q8NDP4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
ZNF439Q8NDP4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ZNF439Q8NDP4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
ZNF439Q8NDP4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.25■□□□□ 0.99
ZNF439Q8NDP4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF439Q8NDP4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF439Q8NDP4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF439Q8NDP4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF439Q8NDP4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.23■□□□□ 0.99
ZNF439Q8NDP4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF439Q8NDP4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF439Q8NDP4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
ZNF439Q8NDP4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF439Q8NDP4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF439Q8NDP4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.22■□□□□ 0.99
ZNF439Q8NDP4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.22■□□□□ 0.99
ZNF439Q8NDP4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF439Q8NDP4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF439Q8NDP4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF439Q8NDP4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF439Q8NDP4 AP004833.2-201ENST00000532228 1454 ntBASIC21.21■□□□□ 0.99
ZNF439Q8NDP4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF439Q8NDP4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
ZNF439Q8NDP4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.21■□□□□ 0.99
ZNF439Q8NDP4 MIR3665-201ENST00000578708 105 ntBASIC21.21■□□□□ 0.99
ZNF439Q8NDP4 AP006261.1-201ENST00000584783 668 ntBASIC21.21■□□□□ 0.99
ZNF439Q8NDP4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF439Q8NDP4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF439Q8NDP4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF439Q8NDP4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ZNF439Q8NDP4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
ZNF439Q8NDP4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF439Q8NDP4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF439Q8NDP4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ZNF439Q8NDP4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF439Q8NDP4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.19■□□□□ 0.98
ZNF439Q8NDP4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
ZNF439Q8NDP4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF439Q8NDP4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.17■□□□□ 0.98
ZNF439Q8NDP4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF439Q8NDP4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF439Q8NDP4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.17■□□□□ 0.98
ZNF439Q8NDP4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF439Q8NDP4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF439Q8NDP4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF439Q8NDP4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF439Q8NDP4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ZNF439Q8NDP4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
ZNF439Q8NDP4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF439Q8NDP4 AC108673.1-201ENST00000510422 1159 ntBASIC21.14■□□□□ 0.97
ZNF439Q8NDP4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.14■□□□□ 0.97
ZNF439Q8NDP4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF439Q8NDP4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF439Q8NDP4 DRD5P2-201ENST00000421395 2012 ntBASIC21.13■□□□□ 0.97
ZNF439Q8NDP4 MIR6090-201ENST00000622481 60 ntBASIC21.13■□□□□ 0.97
ZNF439Q8NDP4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF439Q8NDP4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
ZNF439Q8NDP4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.12■□□□□ 0.97
ZNF439Q8NDP4 AL162393.1-201ENST00000437852 946 ntBASIC21.12■□□□□ 0.97
ZNF439Q8NDP4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF439Q8NDP4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.12■□□□□ 0.97
ZNF439Q8NDP4 AC142086.6-201ENST00000621154 1765 ntBASIC21.11■□□□□ 0.97
ZNF439Q8NDP4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF439Q8NDP4 AC087741.3-201ENST00000624270 1347 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms