Protein–RNA interactions for Protein: Q8NDN9

RCBTB1, RCC1 and BTB domain-containing protein 1, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB1Q8NDN9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RCBTB1Q8NDN9 AC010864.1-201ENST00000609407 1511 ntBASIC25.12■■□□□ 1.61
RCBTB1Q8NDN9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
RCBTB1Q8NDN9 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.11■■□□□ 1.61
RCBTB1Q8NDN9 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RCBTB1Q8NDN9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
RCBTB1Q8NDN9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RCBTB1Q8NDN9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
RCBTB1Q8NDN9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RCBTB1Q8NDN9 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
RCBTB1Q8NDN9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
RCBTB1Q8NDN9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RCBTB1Q8NDN9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RCBTB1Q8NDN9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
RCBTB1Q8NDN9 HSD17B1P1-201ENST00000590052 955 ntBASIC25.08■■□□□ 1.61
RCBTB1Q8NDN9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RCBTB1Q8NDN9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RCBTB1Q8NDN9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.06■■□□□ 1.6
RCBTB1Q8NDN9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RCBTB1Q8NDN9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
RCBTB1Q8NDN9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.06■■□□□ 1.6
RCBTB1Q8NDN9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RCBTB1Q8NDN9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
RCBTB1Q8NDN9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.05■■□□□ 1.6
RCBTB1Q8NDN9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.05■■□□□ 1.6
RCBTB1Q8NDN9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RCBTB1Q8NDN9 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RCBTB1Q8NDN9 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RCBTB1Q8NDN9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RCBTB1Q8NDN9 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.04■■□□□ 1.6
RCBTB1Q8NDN9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.04■■□□□ 1.6
RCBTB1Q8NDN9 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
RCBTB1Q8NDN9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.04■■□□□ 1.6
RCBTB1Q8NDN9 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RCBTB1Q8NDN9 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RCBTB1Q8NDN9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RCBTB1Q8NDN9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RCBTB1Q8NDN9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RCBTB1Q8NDN9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25■■□□□ 1.59
RCBTB1Q8NDN9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25■■□□□ 1.59
RCBTB1Q8NDN9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25■■□□□ 1.59
RCBTB1Q8NDN9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25■■□□□ 1.59
RCBTB1Q8NDN9 LINC00273-201ENST00000539813 1452 ntBASIC25■■□□□ 1.59
RCBTB1Q8NDN9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25■■□□□ 1.59
RCBTB1Q8NDN9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25■■□□□ 1.59
RCBTB1Q8NDN9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.99■■□□□ 1.59
RCBTB1Q8NDN9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
RCBTB1Q8NDN9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RCBTB1Q8NDN9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RCBTB1Q8NDN9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.98■■□□□ 1.59
RCBTB1Q8NDN9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.98■■□□□ 1.59
RCBTB1Q8NDN9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.98■■□□□ 1.59
RCBTB1Q8NDN9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RCBTB1Q8NDN9 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.98■■□□□ 1.59
RCBTB1Q8NDN9 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RCBTB1Q8NDN9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.97■■□□□ 1.59
RCBTB1Q8NDN9 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.97■■□□□ 1.59
RCBTB1Q8NDN9 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RCBTB1Q8NDN9 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RCBTB1Q8NDN9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RCBTB1Q8NDN9 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
RCBTB1Q8NDN9 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
RCBTB1Q8NDN9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RCBTB1Q8NDN9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
RCBTB1Q8NDN9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
RCBTB1Q8NDN9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RCBTB1Q8NDN9 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RCBTB1Q8NDN9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RCBTB1Q8NDN9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
RCBTB1Q8NDN9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RCBTB1Q8NDN9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.92■■□□□ 1.58
RCBTB1Q8NDN9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RCBTB1Q8NDN9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.91■■□□□ 1.58
RCBTB1Q8NDN9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.89■■□□□ 1.58
RCBTB1Q8NDN9 AC127502.1-201ENST00000399971 1502 ntBASIC24.89■■□□□ 1.57
RCBTB1Q8NDN9 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
RCBTB1Q8NDN9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RCBTB1Q8NDN9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RCBTB1Q8NDN9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RCBTB1Q8NDN9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RCBTB1Q8NDN9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RCBTB1Q8NDN9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RCBTB1Q8NDN9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RCBTB1Q8NDN9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RCBTB1Q8NDN9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.87■■□□□ 1.57
RCBTB1Q8NDN9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
RCBTB1Q8NDN9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
RCBTB1Q8NDN9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.86■■□□□ 1.57
RCBTB1Q8NDN9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RCBTB1Q8NDN9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.85■■□□□ 1.57
RCBTB1Q8NDN9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.84■■□□□ 1.57
RCBTB1Q8NDN9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
RCBTB1Q8NDN9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.84■■□□□ 1.57
RCBTB1Q8NDN9 AL135925.1-201ENST00000605920 1701 ntBASIC24.83■■□□□ 1.57
RCBTB1Q8NDN9 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.83■■□□□ 1.57
RCBTB1Q8NDN9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RCBTB1Q8NDN9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
RCBTB1Q8NDN9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
RCBTB1Q8NDN9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
RCBTB1Q8NDN9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms