Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC34.58■■■■□ 3.13
CCDC146Q8IYE0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
CCDC146Q8IYE0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CCDC146Q8IYE0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
CCDC146Q8IYE0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC34.57■■■■□ 3.12
CCDC146Q8IYE0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
CCDC146Q8IYE0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC34.56■■■■□ 3.12
CCDC146Q8IYE0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
CCDC146Q8IYE0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CCDC146Q8IYE0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CCDC146Q8IYE0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC34.53■■■■□ 3.12
CCDC146Q8IYE0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC34.52■■■■□ 3.12
CCDC146Q8IYE0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
CCDC146Q8IYE0 AC021231.2-201ENST00000594613 730 ntBASIC34.51■■■■□ 3.12
CCDC146Q8IYE0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC34.51■■■■□ 3.12
CCDC146Q8IYE0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC34.51■■■■□ 3.11
CCDC146Q8IYE0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC34.5■■■■□ 3.11
CCDC146Q8IYE0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
CCDC146Q8IYE0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC34.48■■■■□ 3.11
CCDC146Q8IYE0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
CCDC146Q8IYE0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC34.48■■■■□ 3.11
CCDC146Q8IYE0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC34.48■■■■□ 3.11
CCDC146Q8IYE0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
CCDC146Q8IYE0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
CCDC146Q8IYE0 AL139393.2-201ENST00000608721 2025 ntBASIC34.47■■■■□ 3.11
CCDC146Q8IYE0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC34.46■■■■□ 3.11
CCDC146Q8IYE0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC34.46■■■■□ 3.11
CCDC146Q8IYE0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC34.45■■■■□ 3.11
CCDC146Q8IYE0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
CCDC146Q8IYE0 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
CCDC146Q8IYE0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC34.43■■■■□ 3.1
CCDC146Q8IYE0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
CCDC146Q8IYE0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC34.43■■■■□ 3.1
CCDC146Q8IYE0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC34.43■■■■□ 3.1
CCDC146Q8IYE0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CCDC146Q8IYE0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC34.42■■■■□ 3.1
CCDC146Q8IYE0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC34.42■■■■□ 3.1
CCDC146Q8IYE0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
CCDC146Q8IYE0 DUX4L29-201ENST00000425409 679 ntBASIC34.42■■■■□ 3.1
CCDC146Q8IYE0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC34.41■■■■□ 3.1
CCDC146Q8IYE0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
CCDC146Q8IYE0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC34.4■■■■□ 3.1
CCDC146Q8IYE0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC34.4■■■■□ 3.1
CCDC146Q8IYE0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
CCDC146Q8IYE0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC34.39■■■■□ 3.1
CCDC146Q8IYE0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
CCDC146Q8IYE0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC34.38■■■■□ 3.09
CCDC146Q8IYE0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
CCDC146Q8IYE0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
CCDC146Q8IYE0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC34.38■■■■□ 3.09
CCDC146Q8IYE0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC34.38■■■■□ 3.09
CCDC146Q8IYE0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC34.38■■■■□ 3.09
CCDC146Q8IYE0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC34.37■■■■□ 3.09
CCDC146Q8IYE0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC34.37■■■■□ 3.09
CCDC146Q8IYE0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
CCDC146Q8IYE0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC34.36■■■■□ 3.09
CCDC146Q8IYE0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC34.36■■■■□ 3.09
CCDC146Q8IYE0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC34.36■■■■□ 3.09
CCDC146Q8IYE0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
CCDC146Q8IYE0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC34.35■■■■□ 3.09
CCDC146Q8IYE0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
CCDC146Q8IYE0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
CCDC146Q8IYE0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC34.35■■■■□ 3.09
CCDC146Q8IYE0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC34.34■■■■□ 3.09
CCDC146Q8IYE0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
CCDC146Q8IYE0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
CCDC146Q8IYE0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC34.33■■■■□ 3.09
CCDC146Q8IYE0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC34.33■■■■□ 3.09
CCDC146Q8IYE0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC34.32■■■■□ 3.09
CCDC146Q8IYE0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC34.31■■■■□ 3.08
CCDC146Q8IYE0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
CCDC146Q8IYE0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
CCDC146Q8IYE0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
CCDC146Q8IYE0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC34.29■■■■□ 3.08
CCDC146Q8IYE0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
CCDC146Q8IYE0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC34.28■■■■□ 3.08
CCDC146Q8IYE0 ABHD17AP4-201ENST00000411545 909 ntBASIC34.28■■■■□ 3.08
CCDC146Q8IYE0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC34.28■■■■□ 3.08
CCDC146Q8IYE0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC34.28■■■■□ 3.08
CCDC146Q8IYE0 LINC00273-201ENST00000539813 1452 ntBASIC34.27■■■■□ 3.08
CCDC146Q8IYE0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC34.27■■■■□ 3.08
CCDC146Q8IYE0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC34.26■■■■□ 3.08
CCDC146Q8IYE0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC34.26■■■■□ 3.08
CCDC146Q8IYE0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC34.26■■■■□ 3.08
CCDC146Q8IYE0 WHAMMP2-203ENST00000563942 1603 ntBASIC34.26■■■■□ 3.07
CCDC146Q8IYE0 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
CCDC146Q8IYE0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CCDC146Q8IYE0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC34.25■■■■□ 3.07
CCDC146Q8IYE0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CCDC146Q8IYE0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
CCDC146Q8IYE0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
CCDC146Q8IYE0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
CCDC146Q8IYE0 AC135983.2-203ENST00000454486 1613 ntBASIC34.24■■■■□ 3.07
CCDC146Q8IYE0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC34.24■■■■□ 3.07
CCDC146Q8IYE0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
CCDC146Q8IYE0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC34.23■■■■□ 3.07
CCDC146Q8IYE0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
CCDC146Q8IYE0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
CCDC146Q8IYE0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
CCDC146Q8IYE0 ZNRF2P2-203ENST00000454624 420 ntBASIC34.22■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms