Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SLF2Q8IX21 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
SLF2Q8IX21 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.4■■■□□ 2.62
SLF2Q8IX21 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.4■■■□□ 2.62
SLF2Q8IX21 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
SLF2Q8IX21 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SLF2Q8IX21 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.39■■■□□ 2.62
SLF2Q8IX21 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
SLF2Q8IX21 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SLF2Q8IX21 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.38■■■□□ 2.61
SLF2Q8IX21 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SLF2Q8IX21 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SLF2Q8IX21 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
SLF2Q8IX21 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.34■■■□□ 2.61
SLF2Q8IX21 AL135925.1-201ENST00000605920 1701 ntBASIC31.33■■■□□ 2.61
SLF2Q8IX21 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
SLF2Q8IX21 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SLF2Q8IX21 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.61
SLF2Q8IX21 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
SLF2Q8IX21 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
SLF2Q8IX21 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SLF2Q8IX21 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
SLF2Q8IX21 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
SLF2Q8IX21 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.3■■■□□ 2.6
SLF2Q8IX21 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
SLF2Q8IX21 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.29■■■□□ 2.6
SLF2Q8IX21 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.28■■■□□ 2.6
SLF2Q8IX21 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.28■■■□□ 2.6
SLF2Q8IX21 AC127502.1-201ENST00000399971 1502 ntBASIC31.27■■■□□ 2.6
SLF2Q8IX21 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SLF2Q8IX21 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SLF2Q8IX21 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SLF2Q8IX21 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.25■■■□□ 2.59
SLF2Q8IX21 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.25■■■□□ 2.59
SLF2Q8IX21 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.24■■■□□ 2.59
SLF2Q8IX21 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
SLF2Q8IX21 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SLF2Q8IX21 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.23■■■□□ 2.59
SLF2Q8IX21 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SLF2Q8IX21 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SLF2Q8IX21 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.21■■■□□ 2.59
SLF2Q8IX21 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
SLF2Q8IX21 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
SLF2Q8IX21 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SLF2Q8IX21 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
SLF2Q8IX21 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.18■■■□□ 2.58
SLF2Q8IX21 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
SLF2Q8IX21 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
SLF2Q8IX21 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SLF2Q8IX21 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.15■■■□□ 2.58
SLF2Q8IX21 AC135983.2-203ENST00000454486 1613 ntBASIC31.14■■■□□ 2.58
SLF2Q8IX21 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
SLF2Q8IX21 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
SLF2Q8IX21 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
SLF2Q8IX21 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.12■■■□□ 2.57
SLF2Q8IX21 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
SLF2Q8IX21 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SLF2Q8IX21 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
SLF2Q8IX21 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
SLF2Q8IX21 HSD17B1P1-201ENST00000590052 955 ntBASIC31.11■■■□□ 2.57
SLF2Q8IX21 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
SLF2Q8IX21 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.09■■■□□ 2.57
SLF2Q8IX21 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.09■■■□□ 2.57
SLF2Q8IX21 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SLF2Q8IX21 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
SLF2Q8IX21 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SLF2Q8IX21 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SLF2Q8IX21 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SLF2Q8IX21 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.08■■■□□ 2.57
SLF2Q8IX21 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SLF2Q8IX21 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SLF2Q8IX21 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
SLF2Q8IX21 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
SLF2Q8IX21 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
SLF2Q8IX21 WHAMMP2-203ENST00000563942 1603 ntBASIC31.08■■■□□ 2.57
SLF2Q8IX21 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.07■■■□□ 2.56
SLF2Q8IX21 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
SLF2Q8IX21 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
SLF2Q8IX21 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
SLF2Q8IX21 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.06■■■□□ 2.56
SLF2Q8IX21 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.05■■■□□ 2.56
SLF2Q8IX21 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SLF2Q8IX21 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SLF2Q8IX21 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SLF2Q8IX21 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.04■■■□□ 2.56
SLF2Q8IX21 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.04■■■□□ 2.56
SLF2Q8IX21 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SLF2Q8IX21 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SLF2Q8IX21 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
SLF2Q8IX21 AC008813.1-201ENST00000536597 885 ntBASIC31.02■■■□□ 2.56
SLF2Q8IX21 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
SLF2Q8IX21 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SLF2Q8IX21 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SLF2Q8IX21 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SLF2Q8IX21 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
SLF2Q8IX21 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.01■■■□□ 2.55
SLF2Q8IX21 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.01■■■□□ 2.55
SLF2Q8IX21 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31■■■□□ 2.55
SLF2Q8IX21 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31■■■□□ 2.55
SLF2Q8IX21 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms