Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
RNF44Q7L0R7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.9■■□□□ 1.58
RNF44Q7L0R7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.9■■□□□ 1.58
RNF44Q7L0R7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RNF44Q7L0R7 ZNRF2P2-203ENST00000454624 420 ntBASIC24.89■■□□□ 1.58
RNF44Q7L0R7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RNF44Q7L0R7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RNF44Q7L0R7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RNF44Q7L0R7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.88■■□□□ 1.57
RNF44Q7L0R7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.88■■□□□ 1.57
RNF44Q7L0R7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.88■■□□□ 1.57
RNF44Q7L0R7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.88■■□□□ 1.57
RNF44Q7L0R7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RNF44Q7L0R7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RNF44Q7L0R7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF44Q7L0R7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF44Q7L0R7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RNF44Q7L0R7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RNF44Q7L0R7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
RNF44Q7L0R7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.85■■□□□ 1.57
RNF44Q7L0R7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.85■■□□□ 1.57
RNF44Q7L0R7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RNF44Q7L0R7 LINC00273-201ENST00000539813 1452 ntBASIC24.83■■□□□ 1.57
RNF44Q7L0R7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.83■■□□□ 1.57
RNF44Q7L0R7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
RNF44Q7L0R7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.82■■□□□ 1.56
RNF44Q7L0R7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RNF44Q7L0R7 ABCB10P1-201ENST00000614297 2181 ntBASIC24.81■■□□□ 1.56
RNF44Q7L0R7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.81■■□□□ 1.56
RNF44Q7L0R7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.81■■□□□ 1.56
RNF44Q7L0R7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
RNF44Q7L0R7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF44Q7L0R7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
RNF44Q7L0R7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.8■■□□□ 1.56
RNF44Q7L0R7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
RNF44Q7L0R7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF44Q7L0R7 MIR7108-201ENST00000614319 87 ntBASIC24.79■■□□□ 1.56
RNF44Q7L0R7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.79■■□□□ 1.56
RNF44Q7L0R7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RNF44Q7L0R7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RNF44Q7L0R7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RNF44Q7L0R7 LINC01971-201ENST00000617888 1048 ntBASIC24.78■■□□□ 1.56
RNF44Q7L0R7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.78■■□□□ 1.56
RNF44Q7L0R7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF44Q7L0R7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.77■■□□□ 1.56
RNF44Q7L0R7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.76■■□□□ 1.55
RNF44Q7L0R7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
RNF44Q7L0R7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
RNF44Q7L0R7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RNF44Q7L0R7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
RNF44Q7L0R7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.74■■□□□ 1.55
RNF44Q7L0R7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF44Q7L0R7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
RNF44Q7L0R7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
RNF44Q7L0R7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RNF44Q7L0R7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.72■■□□□ 1.55
RNF44Q7L0R7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.72■■□□□ 1.55
RNF44Q7L0R7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RNF44Q7L0R7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.72■■□□□ 1.55
RNF44Q7L0R7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.72■■□□□ 1.55
RNF44Q7L0R7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.72■■□□□ 1.55
RNF44Q7L0R7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
RNF44Q7L0R7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
RNF44Q7L0R7 AC135983.2-203ENST00000454486 1613 ntBASIC24.71■■□□□ 1.55
RNF44Q7L0R7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RNF44Q7L0R7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
RNF44Q7L0R7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
RNF44Q7L0R7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
RNF44Q7L0R7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RNF44Q7L0R7 DUX4L11-201ENST00000611504 1267 ntBASIC24.69■■□□□ 1.54
RNF44Q7L0R7 DUX4L12-201ENST00000614593 1267 ntBASIC24.69■■□□□ 1.54
RNF44Q7L0R7 DUX4L14-201ENST00000621227 1267 ntBASIC24.69■■□□□ 1.54
RNF44Q7L0R7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
RNF44Q7L0R7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
RNF44Q7L0R7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
RNF44Q7L0R7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RNF44Q7L0R7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RNF44Q7L0R7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.67■■□□□ 1.54
RNF44Q7L0R7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.67■■□□□ 1.54
RNF44Q7L0R7 WHAMMP2-203ENST00000563942 1603 ntBASIC24.67■■□□□ 1.54
RNF44Q7L0R7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
RNF44Q7L0R7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
RNF44Q7L0R7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RNF44Q7L0R7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
RNF44Q7L0R7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RNF44Q7L0R7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.66■■□□□ 1.54
RNF44Q7L0R7 AP004833.2-201ENST00000532228 1454 ntBASIC24.65■■□□□ 1.54
RNF44Q7L0R7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF44Q7L0R7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.65■■□□□ 1.54
RNF44Q7L0R7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
RNF44Q7L0R7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RNF44Q7L0R7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF44Q7L0R7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
RNF44Q7L0R7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.64■■□□□ 1.54
RNF44Q7L0R7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF44Q7L0R7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.63■■□□□ 1.53
RNF44Q7L0R7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.63■■□□□ 1.53
RNF44Q7L0R7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
RNF44Q7L0R7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.63■■□□□ 1.53
RNF44Q7L0R7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms