Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CNKSR3Q6P9H4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CNKSR3Q6P9H4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.61■■■□□ 2.17
CNKSR3Q6P9H4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.61■■■□□ 2.17
CNKSR3Q6P9H4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.6■■■□□ 2.17
CNKSR3Q6P9H4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CNKSR3Q6P9H4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
CNKSR3Q6P9H4 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
CNKSR3Q6P9H4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
CNKSR3Q6P9H4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CNKSR3Q6P9H4 RNF126P1-201ENST00000567452 1320 ntBASIC28.58■■■□□ 2.17
CNKSR3Q6P9H4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
CNKSR3Q6P9H4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CNKSR3Q6P9H4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
CNKSR3Q6P9H4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CNKSR3Q6P9H4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CNKSR3Q6P9H4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CNKSR3Q6P9H4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.56■■■□□ 2.16
CNKSR3Q6P9H4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.56■■■□□ 2.16
CNKSR3Q6P9H4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
CNKSR3Q6P9H4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.55■■■□□ 2.16
CNKSR3Q6P9H4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CNKSR3Q6P9H4 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.54■■■□□ 2.16
CNKSR3Q6P9H4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CNKSR3Q6P9H4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.54■■■□□ 2.16
CNKSR3Q6P9H4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
CNKSR3Q6P9H4 AL161658.1-201ENST00000623641 1967 ntBASIC28.53■■■□□ 2.16
CNKSR3Q6P9H4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
CNKSR3Q6P9H4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
CNKSR3Q6P9H4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CNKSR3Q6P9H4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
CNKSR3Q6P9H4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CNKSR3Q6P9H4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.51■■■□□ 2.15
CNKSR3Q6P9H4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CNKSR3Q6P9H4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.51■■■□□ 2.15
CNKSR3Q6P9H4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CNKSR3Q6P9H4 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.5■■■□□ 2.15
CNKSR3Q6P9H4 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CNKSR3Q6P9H4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
CNKSR3Q6P9H4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CNKSR3Q6P9H4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.47■■■□□ 2.15
CNKSR3Q6P9H4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC28.47■■■□□ 2.15
CNKSR3Q6P9H4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CNKSR3Q6P9H4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.46■■■□□ 2.15
CNKSR3Q6P9H4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
CNKSR3Q6P9H4 AC010864.1-201ENST00000609407 1511 ntBASIC28.46■■■□□ 2.15
CNKSR3Q6P9H4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CNKSR3Q6P9H4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.45■■■□□ 2.14
CNKSR3Q6P9H4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CNKSR3Q6P9H4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CNKSR3Q6P9H4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CNKSR3Q6P9H4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
CNKSR3Q6P9H4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CNKSR3Q6P9H4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
CNKSR3Q6P9H4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.42■■■□□ 2.14
CNKSR3Q6P9H4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.42■■■□□ 2.14
CNKSR3Q6P9H4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CNKSR3Q6P9H4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CNKSR3Q6P9H4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CNKSR3Q6P9H4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.4■■■□□ 2.14
CNKSR3Q6P9H4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.4■■■□□ 2.14
CNKSR3Q6P9H4 AC022413.1-201ENST00000624602 984 ntBASIC28.4■■■□□ 2.14
CNKSR3Q6P9H4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
CNKSR3Q6P9H4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
CNKSR3Q6P9H4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CNKSR3Q6P9H4 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
CNKSR3Q6P9H4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.38■■■□□ 2.13
CNKSR3Q6P9H4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CNKSR3Q6P9H4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CNKSR3Q6P9H4 AC008813.1-201ENST00000536597 885 ntBASIC28.37■■■□□ 2.13
CNKSR3Q6P9H4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CNKSR3Q6P9H4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.37■■■□□ 2.13
CNKSR3Q6P9H4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CNKSR3Q6P9H4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CNKSR3Q6P9H4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.35■■■□□ 2.13
CNKSR3Q6P9H4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.35■■■□□ 2.13
CNKSR3Q6P9H4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CNKSR3Q6P9H4 NTF6A-201ENST00000591175 560 ntBASIC28.34■■■□□ 2.13
CNKSR3Q6P9H4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.34■■■□□ 2.13
CNKSR3Q6P9H4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.34■■■□□ 2.13
CNKSR3Q6P9H4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
CNKSR3Q6P9H4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CNKSR3Q6P9H4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CNKSR3Q6P9H4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CNKSR3Q6P9H4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
CNKSR3Q6P9H4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
CNKSR3Q6P9H4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.31■■■□□ 2.12
CNKSR3Q6P9H4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CNKSR3Q6P9H4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CNKSR3Q6P9H4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CNKSR3Q6P9H4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CNKSR3Q6P9H4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.28■■■□□ 2.12
CNKSR3Q6P9H4 AC012354.3-201ENST00000623734 483 ntBASIC28.28■■■□□ 2.12
CNKSR3Q6P9H4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CNKSR3Q6P9H4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
CNKSR3Q6P9H4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CNKSR3Q6P9H4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
CNKSR3Q6P9H4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CNKSR3Q6P9H4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CNKSR3Q6P9H4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms