Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 YKR012CYKR012C 378 nt9.77□□□□□ -0.85
UFD2P54860 YCP4YCR004C 744 nt9.76□□□□□ -0.85
UFD2P54860 MOB1YIL106W 945 nt9.76□□□□□ -0.85
UFD2P54860 UGP1YKL035W 1500 nt9.76□□□□□ -0.85
UFD2P54860 SAM50YNL026W 1455 nt9.75□□□□□ -0.85
UFD2P54860 YHM2YMR241W 945 nt9.74□□□□□ -0.85
UFD2P54860 CRC1YOR100C 984 nt9.74□□□□□ -0.85
UFD2P54860 snR31snR31 225 nt9.74□□□□□ -0.85
UFD2P54860 LYS20YDL182W 1287 nt9.73□□□□□ -0.85
UFD2P54860 FAF1YIL019W 1041 nt9.73□□□□□ -0.85
UFD2P54860 YKL053WYKL053W 375 nt9.73□□□□□ -0.85
UFD2P54860 SDS24YBR214W 1584 nt9.72□□□□□ -0.85
UFD2P54860 HIS2YFR025C 1008 nt9.71□□□□□ -0.86
UFD2P54860 RPN14YGL004C 1254 nt9.71□□□□□ -0.86
UFD2P54860 REX2YLR059C 810 nt9.71□□□□□ -0.86
UFD2P54860 SWM1YDR260C 513 nt9.7□□□□□ -0.86
UFD2P54860 CYC3YAL039C 810 nt9.7□□□□□ -0.86
UFD2P54860 SRN2YLR119W 642 nt9.7□□□□□ -0.86
UFD2P54860 PUS5YLR165C 765 nt9.7□□□□□ -0.86
UFD2P54860 SNX3YOR357C 489 nt9.7□□□□□ -0.86
UFD2P54860 RPD3YNL330C 1302 nt9.7□□□□□ -0.86
UFD2P54860 BNS1YGR230W 414 nt9.69□□□□□ -0.86
UFD2P54860 MAS1YLR163C 1389 nt9.68□□□□□ -0.86
UFD2P54860 SER2YGR208W 930 nt9.68□□□□□ -0.86
UFD2P54860 RIB1YBL033C 1038 nt9.68□□□□□ -0.86
UFD2P54860 VBA3YCL069W 1377 nt9.67□□□□□ -0.86
UFD2P54860 YIA6YIL006W 1122 nt9.67□□□□□ -0.86
UFD2P54860 SRP54YPR088C 1626 nt9.67□□□□□ -0.86
UFD2P54860 REC114YMR133W 1287 nt9.66□□□□□ -0.86
UFD2P54860 SSL2YIL143C 2532 nt9.66□□□□□ -0.86
UFD2P54860 SAN1YDR143C 1833 nt9.66□□□□□ -0.86
UFD2P54860 ENO1YGR254W 1314 nt9.65□□□□□ -0.86
UFD2P54860 SRP102YKL154W 735 nt9.64□□□□□ -0.87
UFD2P54860 RIM2YBR192W 1134 nt9.64□□□□□ -0.87
UFD2P54860 SOD2YHR008C 702 nt9.63□□□□□ -0.87
UFD2P54860 YIR018C-AYIR018C-A 138 nt9.63□□□□□ -0.87
UFD2P54860 CWP2YKL096W-A 279 nt9.63□□□□□ -0.87
UFD2P54860 HTS1YPR033C 1641 nt9.63□□□□□ -0.87
UFD2P54860 KGD2YDR148C 1392 nt9.63□□□□□ -0.87
UFD2P54860 FHN1YGR131W 525 nt9.62□□□□□ -0.87
UFD2P54860 ERG6YML008C 1152 nt9.62□□□□□ -0.87
UFD2P54860 BSP1YPR171W 1731 nt9.62□□□□□ -0.87
UFD2P54860 MET2YNL277W 1461 nt9.6□□□□□ -0.87
UFD2P54860 ODC1YPL134C 933 nt9.6□□□□□ -0.87
UFD2P54860 ERO1YML130C 1692 nt9.6□□□□□ -0.87
UFD2P54860 TGA1tA(UGC)A 73 nt9.59□□□□□ -0.87
UFD2P54860 tA(UGC)EtA(UGC)E 73 nt9.59□□□□□ -0.87
UFD2P54860 tA(UGC)GtA(UGC)G 73 nt9.59□□□□□ -0.87
UFD2P54860 tA(UGC)LtA(UGC)L 73 nt9.59□□□□□ -0.87
UFD2P54860 tA(UGC)OtA(UGC)O 73 nt9.59□□□□□ -0.87
UFD2P54860 YLR280CYLR280C 351 nt9.59□□□□□ -0.87
UFD2P54860 ATG17YLR423C 1254 nt9.59□□□□□ -0.87
UFD2P54860 RPC31YNL151C 756 nt9.58□□□□□ -0.88
UFD2P54860 HMT1YBR034C 1047 nt9.58□□□□□ -0.88
UFD2P54860 KDX1YKL161C 1302 nt9.57□□□□□ -0.88
UFD2P54860 BMT5YIL096C 1011 nt9.57□□□□□ -0.88
UFD2P54860 YPT11YNL304W 1254 nt9.57□□□□□ -0.88
UFD2P54860 KRR1YCL059C 951 nt9.56□□□□□ -0.88
UFD2P54860 YMR007WYMR007W 381 nt9.56□□□□□ -0.88
UFD2P54860 YGR210CYGR210C 1236 nt9.55□□□□□ -0.88
UFD2P54860 YFR020WYFR020W 699 nt9.54□□□□□ -0.88
UFD2P54860 SBP1YHL034C 885 nt9.54□□□□□ -0.88
UFD2P54860 YMR209CYMR209C 1374 nt9.53□□□□□ -0.88
UFD2P54860 DPL1YDR294C 1770 nt9.53□□□□□ -0.88
UFD2P54860 GAS1YMR307W 1680 nt9.52□□□□□ -0.89
UFD2P54860 SFP1YLR403W 2052 nt9.52□□□□□ -0.89
UFD2P54860 PTC6YCR079W 1329 nt9.52□□□□□ -0.89
UFD2P54860 FCY1YPR062W 477 nt9.5□□□□□ -0.89
UFD2P54860 YPL108WYPL108W 507 nt9.49□□□□□ -0.89
UFD2P54860 POP2YNR052C 1302 nt9.49□□□□□ -0.89
UFD2P54860 RCR1YBR005W 642 nt9.48□□□□□ -0.89
UFD2P54860 YPL071CYPL071C 471 nt9.48□□□□□ -0.89
UFD2P54860 RSM7YJR113C 744 nt9.47□□□□□ -0.89
UFD2P54860 MDM35YKL053C-A 261 nt9.47□□□□□ -0.89
UFD2P54860 YDR306CYDR306C 1437 nt9.47□□□□□ -0.89
UFD2P54860 YER152W-AYER152W-A 567 nt9.46□□□□□ -0.9
UFD2P54860 YMR316C-BYMR316C-B 309 nt9.44□□□□□ -0.9
UFD2P54860 THI3YDL080C 1830 nt9.43□□□□□ -0.9
UFD2P54860 GGA2YHR108W 1758 nt9.43□□□□□ -0.9
UFD2P54860 YJL160CYJL160C 864 nt9.42□□□□□ -0.9
UFD2P54860 YMR166CYMR166C 1107 nt9.41□□□□□ -0.9
UFD2P54860 HMG2YLR450W 3138 nt9.41□□□□□ -0.9
UFD2P54860 PUS7YOR243C 2031 nt9.41□□□□□ -0.9
UFD2P54860 LEU4YNL104C 1860 nt9.4□□□□□ -0.9
UFD2P54860 GPM1YKL152C 744 nt9.4□□□□□ -0.9
UFD2P54860 YHL008CYHL008C 1884 nt9.4□□□□□ -0.91
UFD2P54860 YDR467CYDR467C 327 nt9.39□□□□□ -0.91
UFD2P54860 SWP1YMR149W 861 nt9.39□□□□□ -0.91
UFD2P54860 YNL165WYNL165W 1221 nt9.39□□□□□ -0.91
UFD2P54860 DMA2YNL116W 1569 nt9.38□□□□□ -0.91
UFD2P54860 UTP6YDR449C 1323 nt9.38□□□□□ -0.91
UFD2P54860 TPO4YOR273C 1980 nt9.38□□□□□ -0.91
UFD2P54860 LSP1YPL004C 1026 nt9.38□□□□□ -0.91
UFD2P54860 PET18YCR020C 648 nt9.36□□□□□ -0.91
UFD2P54860 ARP10YDR106W 855 nt9.36□□□□□ -0.91
UFD2P54860 EMC3YKL207W 762 nt9.36□□□□□ -0.91
UFD2P54860 PSD1YNL169C 1503 nt9.36□□□□□ -0.91
UFD2P54860 tE(CUC)DtE(CUC)D 72 nt9.35□□□□□ -0.91
UFD2P54860 tE(CUC)ItE(CUC)I 72 nt9.35□□□□□ -0.91
UFD2P54860 YLR460CYLR460C 1131 nt9.35□□□□□ -0.91
Retrieved 100 of 7,029 protein–RNA pairs in 48 ms