Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC33.5■■■□□ 2.95
COL15A1P39059 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC33.5■■■□□ 2.95
COL15A1P39059 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC33.49■■■□□ 2.95
COL15A1P39059 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC33.49■■■□□ 2.95
COL15A1P39059 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC33.48■■■□□ 2.95
COL15A1P39059 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
COL15A1P39059 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
COL15A1P39059 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
COL15A1P39059 AL161658.1-201ENST00000623641 1967 ntBASIC33.47■■■□□ 2.95
COL15A1P39059 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC33.47■■■□□ 2.95
COL15A1P39059 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
COL15A1P39059 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
COL15A1P39059 LINC00273-201ENST00000539813 1452 ntBASIC33.46■■■□□ 2.95
COL15A1P39059 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC33.46■■■□□ 2.95
COL15A1P39059 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC33.45■■■□□ 2.95
COL15A1P39059 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC33.45■■■□□ 2.95
COL15A1P39059 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC33.45■■■□□ 2.95
COL15A1P39059 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC33.45■■■□□ 2.95
COL15A1P39059 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC33.45■■■□□ 2.94
COL15A1P39059 CHST11-202ENST00000546689 756 ntTSL 2 BASIC33.44■■■□□ 2.94
COL15A1P39059 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC33.44■■■□□ 2.94
COL15A1P39059 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
COL15A1P39059 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
COL15A1P39059 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC33.43■■■□□ 2.94
COL15A1P39059 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC33.43■■■□□ 2.94
COL15A1P39059 RARRES2P2-201ENST00000394842 485 ntBASIC33.42■■■□□ 2.94
COL15A1P39059 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
COL15A1P39059 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
COL15A1P39059 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
COL15A1P39059 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
COL15A1P39059 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC33.38■■■□□ 2.93
COL15A1P39059 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC33.38■■■□□ 2.93
COL15A1P39059 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC33.38■■■□□ 2.93
COL15A1P39059 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC33.38■■■□□ 2.93
COL15A1P39059 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
COL15A1P39059 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
COL15A1P39059 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC33.36■■■□□ 2.93
COL15A1P39059 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
COL15A1P39059 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
COL15A1P39059 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC33.35■■■□□ 2.93
COL15A1P39059 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC33.34■■■□□ 2.93
COL15A1P39059 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
COL15A1P39059 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
COL15A1P39059 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
COL15A1P39059 AC010864.1-201ENST00000609407 1511 ntBASIC33.34■■■□□ 2.93
COL15A1P39059 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC33.34■■■□□ 2.93
COL15A1P39059 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
COL15A1P39059 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC33.33■■■□□ 2.93
COL15A1P39059 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
COL15A1P39059 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC33.33■■■□□ 2.93
COL15A1P39059 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
COL15A1P39059 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
COL15A1P39059 GPX1-201ENST00000419349 1106 ntBASIC33.32■■■□□ 2.92
COL15A1P39059 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC33.31■■■□□ 2.92
COL15A1P39059 ABHD17AP5-201ENST00000580133 923 ntBASIC33.3■■■□□ 2.92
COL15A1P39059 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC33.3■■■□□ 2.92
COL15A1P39059 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
COL15A1P39059 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
COL15A1P39059 TPT1-202ENST00000379055 948 ntTSL 2 BASIC33.28■■■□□ 2.92
COL15A1P39059 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
COL15A1P39059 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC33.27■■■□□ 2.92
COL15A1P39059 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
COL15A1P39059 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC33.26■■■□□ 2.92
COL15A1P39059 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC33.26■■■□□ 2.92
COL15A1P39059 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC33.26■■■□□ 2.92
COL15A1P39059 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC33.26■■■□□ 2.92
COL15A1P39059 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC33.25■■■□□ 2.91
COL15A1P39059 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
COL15A1P39059 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
COL15A1P39059 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
COL15A1P39059 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
COL15A1P39059 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
COL15A1P39059 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC33.22■■■□□ 2.91
COL15A1P39059 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
COL15A1P39059 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC33.21■■■□□ 2.91
COL15A1P39059 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC33.21■■■□□ 2.91
COL15A1P39059 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
COL15A1P39059 RNF126P1-201ENST00000567452 1320 ntBASIC33.2■■■□□ 2.91
COL15A1P39059 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC33.2■■■□□ 2.91
COL15A1P39059 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
COL15A1P39059 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC33.2■■■□□ 2.9
COL15A1P39059 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
COL15A1P39059 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
COL15A1P39059 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC33.18■■■□□ 2.9
COL15A1P39059 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC33.17■■■□□ 2.9
COL15A1P39059 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC33.16■■■□□ 2.9
COL15A1P39059 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC33.16■■■□□ 2.9
COL15A1P39059 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
COL15A1P39059 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC33.16■■■□□ 2.9
COL15A1P39059 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
COL15A1P39059 CEP120-209ENST00000515110 606 ntTSL 3 BASIC33.14■■■□□ 2.9
COL15A1P39059 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC33.13■■■□□ 2.89
COL15A1P39059 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC33.13■■■□□ 2.89
COL15A1P39059 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC33.13■■■□□ 2.89
COL15A1P39059 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
COL15A1P39059 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
COL15A1P39059 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
COL15A1P39059 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
COL15A1P39059 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
COL15A1P39059 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC33.11■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms