Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 YDR306CYDR306C 1437 nt8.22□□□□□ -1.09
TDP1P38319 CCT5YJR064W 1689 nt8.22□□□□□ -1.09
TDP1P38319 GPM1YKL152C 744 nt8.22□□□□□ -1.09
TDP1P38319 MEX67YPL169C 1800 nt8.22□□□□□ -1.09
TDP1P38319 KGD2YDR148C 1392 nt8.22□□□□□ -1.09
TDP1P38319 THI3YDL080C 1830 nt8.2□□□□□ -1.1
TDP1P38319 HBS1YKR084C 1836 nt8.2□□□□□ -1.1
TDP1P38319 TRP2YER090W 1524 nt8.2□□□□□ -1.1
TDP1P38319 YEL008WYEL008W 381 nt8.2□□□□□ -1.1
TDP1P38319 HXT11YOL156W 1704 nt8.2□□□□□ -1.1
TDP1P38319 YBL095WYBL095W 813 nt8.19□□□□□ -1.1
TDP1P38319 MIM1YOL026C 342 nt8.19□□□□□ -1.1
TDP1P38319 IML3YBR107C 738 nt8.19□□□□□ -1.1
TDP1P38319 CTI6YPL181W 1521 nt8.19□□□□□ -1.1
TDP1P38319 THI6YPL214C 1623 nt8.18□□□□□ -1.1
TDP1P38319 YKL053WYKL053W 375 nt8.18□□□□□ -1.1
TDP1P38319 DUR3YHL016C 2208 nt8.16□□□□□ -1.1
TDP1P38319 ABZ2YMR289W 1125 nt8.16□□□□□ -1.1
TDP1P38319 YMR316C-BYMR316C-B 309 nt8.16□□□□□ -1.1
TDP1P38319 AMF1YOR378W 1548 nt8.16□□□□□ -1.1
TDP1P38319 PAU21YOR394W 495 nt8.16□□□□□ -1.1
TDP1P38319 PAU22YPL282C 495 nt8.16□□□□□ -1.1
TDP1P38319 YLR072WYLR072W 2082 nt8.15□□□□□ -1.1
TDP1P38319 SAN1YDR143C 1833 nt8.15□□□□□ -1.1
TDP1P38319 CPD1YGR247W 720 nt8.15□□□□□ -1.1
TDP1P38319 GGA2YHR108W 1758 nt8.15□□□□□ -1.11
TDP1P38319 LPD1YFL018C 1500 nt8.14□□□□□ -1.11
TDP1P38319 AAT1YKL106W 1356 nt8.14□□□□□ -1.11
TDP1P38319 SRM1YGL097W 1449 nt8.12□□□□□ -1.11
TDP1P38319 PAB1YER165W 1734 nt8.12□□□□□ -1.11
TDP1P38319 SBP1YHL034C 885 nt8.11□□□□□ -1.11
TDP1P38319 EMC3YKL207W 762 nt8.11□□□□□ -1.11
TDP1P38319 PUS7YOR243C 2031 nt8.11□□□□□ -1.11
TDP1P38319 YMC2YBR104W 990 nt8.1□□□□□ -1.11
TDP1P38319 ENO2YHR174W 1314 nt8.09□□□□□ -1.11
TDP1P38319 UFD1YGR048W 1086 nt8.09□□□□□ -1.11
TDP1P38319 tS(GCU)LtS(GCU)L 80 nt8.09□□□□□ -1.11
TDP1P38319 MHF1YOL086W-A 273 nt8.09□□□□□ -1.11
TDP1P38319 ORT1YOR130C 879 nt8.09□□□□□ -1.11
TDP1P38319 ARO7YPR060C 771 nt8.09□□□□□ -1.11
TDP1P38319 ESS1YJR017C 513 nt8.08□□□□□ -1.12
TDP1P38319 TPC1YGR096W 945 nt8.06□□□□□ -1.12
TDP1P38319 MRS4YKR052C 915 nt8.05□□□□□ -1.12
TDP1P38319 AAC3YBR085W 924 nt8.05□□□□□ -1.12
TDP1P38319 NSG2YNL156C 900 nt8.04□□□□□ -1.12
TDP1P38319 YMR210WYMR210W 1350 nt8.04□□□□□ -1.12
TDP1P38319 FTH1YBR207W 1398 nt8.04□□□□□ -1.12
TDP1P38319 SRP54YPR088C 1626 nt8.03□□□□□ -1.12
TDP1P38319 LEU2YCL018W 1095 nt8.03□□□□□ -1.12
TDP1P38319 NAM8YHR086W 1572 nt8.02□□□□□ -1.13
TDP1P38319 DUS3YLR401C 2007 nt8.02□□□□□ -1.13
TDP1P38319 FIT1YDR534C 1587 nt8.01□□□□□ -1.13
TDP1P38319 snR86snR86 1004 nt8.01□□□□□ -1.13
TDP1P38319 snR4snR4 186 nt8.01□□□□□ -1.13
TDP1P38319 YRF1-3YGR296W 5580 nt8□□□□□ -1.13
TDP1P38319 YRF1-6YNL339C 5580 nt8□□□□□ -1.13
TDP1P38319 YRF1-7YPL283C 5580 nt8□□□□□ -1.13
TDP1P38319 GAS1YMR307W 1680 nt8□□□□□ -1.13
TDP1P38319 POT1YIL160C 1254 nt8□□□□□ -1.13
TDP1P38319 LEA1YPL213W 717 nt7.99□□□□□ -1.13
TDP1P38319 ABP1YCR088W 1779 nt7.98□□□□□ -1.13
TDP1P38319 PTC6YCR079W 1329 nt7.98□□□□□ -1.13
TDP1P38319 TMS1YDR105C 1422 nt7.97□□□□□ -1.13
TDP1P38319 PAU5YFL020C 369 nt7.97□□□□□ -1.13
TDP1P38319 NIF3YGL221C 867 nt7.97□□□□□ -1.13
TDP1P38319 REX2YLR059C 810 nt7.97□□□□□ -1.13
TDP1P38319 TAF13YML098W 504 nt7.97□□□□□ -1.13
TDP1P38319 YLR173WYLR173W 1827 nt7.96□□□□□ -1.13
TDP1P38319 SEN2YLR105C 1134 nt7.96□□□□□ -1.14
TDP1P38319 PGC1YPL206C 966 nt7.96□□□□□ -1.14
TDP1P38319 YIL177CYIL177C 5277 nt7.96□□□□□ -1.14
TDP1P38319 RTG2YGL252C 1767 nt7.96□□□□□ -1.14
TDP1P38319 POP2YNR052C 1302 nt7.95□□□□□ -1.14
TDP1P38319 DIA4YHR011W 1341 nt7.94□□□□□ -1.14
TDP1P38319 ADE16YLR028C 1776 nt7.93□□□□□ -1.14
TDP1P38319 NAS6YGR232W 687 nt7.93□□□□□ -1.14
TDP1P38319 APS2YJR058C 444 nt7.92□□□□□ -1.14
TDP1P38319 HIS3YOR202W 663 nt7.92□□□□□ -1.14
TDP1P38319 YPT11YNL304W 1254 nt7.91□□□□□ -1.14
TDP1P38319 TUB4YLR212C 1422 nt7.91□□□□□ -1.14
TDP1P38319 YBR056WYBR056W 1506 nt7.91□□□□□ -1.14
TDP1P38319 GCD11YER025W 1584 nt7.9□□□□□ -1.14
TDP1P38319 NAS2YIL007C 663 nt7.9□□□□□ -1.14
TDP1P38319 PUP1YOR157C 786 nt7.9□□□□□ -1.14
TDP1P38319 YBR232CYBR232C 360 nt7.9□□□□□ -1.14
TDP1P38319 ADE5,7YGL234W 2409 nt7.9□□□□□ -1.15
TDP1P38319 MET30YIL046W 1923 nt7.9□□□□□ -1.15
TDP1P38319 THP3YPR045C 1413 nt7.89□□□□□ -1.15
TDP1P38319 PAR32YDL173W 888 nt7.89□□□□□ -1.15
TDP1P38319 CDD1YLR245C 429 nt7.89□□□□□ -1.15
TDP1P38319 SPE2YOL052C 1191 nt7.89□□□□□ -1.15
TDP1P38319 NAP1YKR048C 1254 nt7.88□□□□□ -1.15
TDP1P38319 LYS20YDL182W 1287 nt7.87□□□□□ -1.15
TDP1P38319 STP3YLR375W 1032 nt7.87□□□□□ -1.15
TDP1P38319 GSF2YML048W 1212 nt7.87□□□□□ -1.15
TDP1P38319 FSH2YMR222C 672 nt7.87□□□□□ -1.15
TDP1P38319 YNL190WYNL190W 615 nt7.87□□□□□ -1.15
TDP1P38319 YJL009WYJL009W 327 nt7.86□□□□□ -1.15
TDP1P38319 MEP1YGR121C 1479 nt7.86□□□□□ -1.15
TDP1P38319 ECM10YEL030W 1935 nt7.86□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 52.7 ms