Protein–RNA interactions for Protein: P24276

SSD1, Protein SSD1, yeastyeast

Known RBP RIP-Chip data

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSD1P24276 UGP1YKL035W 1500 nt9.14□□□□□ -0.95
SSD1P24276 ACO2YJL200C 2370 nt9.13□□□□□ -0.95
SSD1P24276 HIS2YFR025C 1008 nt9.13□□□□□ -0.95
SSD1P24276 RPN14YGL004C 1254 nt9.13□□□□□ -0.95
SSD1P24276 SWM1YDR260C 513 nt9.12□□□□□ -0.95
SSD1P24276 YKR012CYKR012C 378 nt9.12□□□□□ -0.95
SSD1P24276 MOB1YIL106W 945 nt9.11□□□□□ -0.95
SSD1P24276 REX2YLR059C 810 nt9.11□□□□□ -0.95
SSD1P24276 CRC1YOR100C 984 nt9.11□□□□□ -0.95
SSD1P24276 YPL041CYPL041C 624 nt9.11□□□□□ -0.95
SSD1P24276 SDS24YBR214W 1584 nt9.11□□□□□ -0.95
SSD1P24276 RPD3YNL330C 1302 nt9.1□□□□□ -0.95
SSD1P24276 SAM50YNL026W 1455 nt9.1□□□□□ -0.95
SSD1P24276 CYC3YAL039C 810 nt9.1□□□□□ -0.95
SSD1P24276 AAC3YBR085W 924 nt9.1□□□□□ -0.95
SSD1P24276 LYS20YDL182W 1287 nt9.09□□□□□ -0.95
SSD1P24276 YKL053WYKL053W 375 nt9.09□□□□□ -0.95
SSD1P24276 CWP2YKL096W-A 279 nt9.09□□□□□ -0.95
SSD1P24276 SNX3YOR357C 489 nt9.09□□□□□ -0.95
SSD1P24276 SER2YGR208W 930 nt9.08□□□□□ -0.96
SSD1P24276 YIA6YIL006W 1122 nt9.08□□□□□ -0.96
SSD1P24276 MGM101YJR144W 810 nt9.08□□□□□ -0.96
SSD1P24276 RIB1YBL033C 1038 nt9.08□□□□□ -0.96
SSD1P24276 HXT10YFL011W 1641 nt9.08□□□□□ -0.96
SSD1P24276 SSL2YIL143C 2532 nt9.07□□□□□ -0.96
SSD1P24276 VBA3YCL069W 1377 nt9.07□□□□□ -0.96
SSD1P24276 SRP102YKL154W 735 nt9.06□□□□□ -0.96
SSD1P24276 SRP54YPR088C 1626 nt9.05□□□□□ -0.96
SSD1P24276 SAN1YDR143C 1833 nt9.05□□□□□ -0.96
SSD1P24276 ENO1YGR254W 1314 nt9.05□□□□□ -0.96
SSD1P24276 KRR1YCL059C 951 nt9.04□□□□□ -0.96
SSD1P24276 HTS1YPR033C 1641 nt9.04□□□□□ -0.96
SSD1P24276 ECM27YJR106W 2178 nt9.03□□□□□ -0.96
SSD1P24276 HEL2YDR266C 1920 nt9.02□□□□□ -0.97
SSD1P24276 RIM2YBR192W 1134 nt9.02□□□□□ -0.97
SSD1P24276 YPT11YNL304W 1254 nt9.01□□□□□ -0.97
SSD1P24276 KGD2YDR148C 1392 nt9□□□□□ -0.97
SSD1P24276 SOD2YHR008C 702 nt9□□□□□ -0.97
SSD1P24276 ODC1YPL134C 933 nt9□□□□□ -0.97
SSD1P24276 RPC31YNL151C 756 nt8.99□□□□□ -0.97
SSD1P24276 ERO1YML130C 1692 nt8.99□□□□□ -0.97
SSD1P24276 CSM2YIL132C 642 nt8.98□□□□□ -0.97
SSD1P24276 YLR280CYLR280C 351 nt8.98□□□□□ -0.97
SSD1P24276 ERG6YML008C 1152 nt8.98□□□□□ -0.97
SSD1P24276 YMR007WYMR007W 381 nt8.98□□□□□ -0.97
SSD1P24276 YRF1-2YER190W 5046 nt8.96□□□□□ -0.97
SSD1P24276 YGL114WYGL114W 2178 nt8.96□□□□□ -0.97
SSD1P24276 HMG2YLR450W 3138 nt8.95□□□□□ -0.98
SSD1P24276 YFR020WYFR020W 699 nt8.95□□□□□ -0.98
SSD1P24276 SBP1YHL034C 885 nt8.95□□□□□ -0.98 RIP-Chip
SSD1P24276 YGR210CYGR210C 1236 nt8.94□□□□□ -0.98 RIP-Chip
SSD1P24276 RIM8YGL045W 1629 nt8.94□□□□□ -0.98
SSD1P24276 DPL1YDR294C 1770 nt8.94□□□□□ -0.98
SSD1P24276 YLR173WYLR173W 1827 nt8.94□□□□□ -0.98
SSD1P24276 TGA1tA(UGC)A 73 nt8.93□□□□□ -0.98
SSD1P24276 tA(UGC)EtA(UGC)E 73 nt8.93□□□□□ -0.98
SSD1P24276 tA(UGC)GtA(UGC)G 73 nt8.93□□□□□ -0.98
SSD1P24276 tA(UGC)LtA(UGC)L 73 nt8.93□□□□□ -0.98
SSD1P24276 tA(UGC)OtA(UGC)O 73 nt8.93□□□□□ -0.98
SSD1P24276 GAS1YMR307W 1680 nt8.93□□□□□ -0.98
SSD1P24276 URA8YJR103W 1737 nt8.91□□□□□ -0.98
SSD1P24276 PTC6YCR079W 1329 nt8.91□□□□□ -0.98
SSD1P24276 RCR1YBR005W 642 nt8.91□□□□□ -0.98
SSD1P24276 TPO4YOR273C 1980 nt8.91□□□□□ -0.98
SSD1P24276 SNU66YOR308C 1764 nt8.91□□□□□ -0.98
SSD1P24276 UBP13YBL067C 2244 nt8.9□□□□□ -0.98
SSD1P24276 POP2YNR052C 1302 nt8.9□□□□□ -0.98
SSD1P24276 MDM35YKL053C-A 261 nt8.9□□□□□ -0.98
SSD1P24276 YPL108WYPL108W 507 nt8.9□□□□□ -0.98
SSD1P24276 HDA1YNL021W 2121 nt8.89□□□□□ -0.99
SSD1P24276 RSM7YJR113C 744 nt8.89□□□□□ -0.99
SSD1P24276 NSG2YNL156C 900 nt8.88□□□□□ -0.99
SSD1P24276 YMR316C-BYMR316C-B 309 nt8.87□□□□□ -0.99
SSD1P24276 YER152W-AYER152W-A 567 nt8.86□□□□□ -0.99
SSD1P24276 FCY1YPR062W 477 nt8.85□□□□□ -0.99
SSD1P24276 GGA2YHR108W 1758 nt8.85□□□□□ -0.99
SSD1P24276 THI3YDL080C 1830 nt8.84□□□□□ -0.99
SSD1P24276 YJL160CYJL160C 864 nt8.83□□□□□ -1
SSD1P24276 YMR166CYMR166C 1107 nt8.83□□□□□ -1
SSD1P24276 YMR209CYMR209C 1374 nt8.83□□□□□ -1
SSD1P24276 DMA2YNL116W 1569 nt8.82□□□□□ -1
SSD1P24276 GPM1YKL152C 744 nt8.81□□□□□ -1
SSD1P24276 LEU4YNL104C 1860 nt8.8□□□□□ -1
SSD1P24276 tE(CUC)DtE(CUC)D 72 nt8.78□□□□□ -1
SSD1P24276 tE(CUC)ItE(CUC)I 72 nt8.78□□□□□ -1
SSD1P24276 YDR467CYDR467C 327 nt8.78□□□□□ -1
SSD1P24276 YLR460CYLR460C 1131 nt8.78□□□□□ -1
SSD1P24276 YRF1-3YGR296W 5580 nt8.77□□□□□ -1.01
SSD1P24276 YRF1-6YNL339C 5580 nt8.77□□□□□ -1.01
SSD1P24276 YRF1-7YPL283C 5580 nt8.77□□□□□ -1.01
SSD1P24276 YJL045WYJL045W 1905 nt8.77□□□□□ -1.01
SSD1P24276 ADE2YOR128C 1716 nt8.77□□□□□ -1.01
SSD1P24276 LSP1YPL004C 1026 nt8.76□□□□□ -1.01
SSD1P24276 COG1YGL223C 1254 nt8.75□□□□□ -1.01
SSD1P24276 EMC3YKL207W 762 nt8.75□□□□□ -1.01
SSD1P24276 OCH1YGL038C 1443 nt8.74□□□□□ -1.01
SSD1P24276 CAK1YFL029C 1107 nt8.74□□□□□ -1.01
SSD1P24276 CHS7YHR142W 951 nt8.74□□□□□ -1.01
SSD1P24276 RRT14YIL127C 621 nt8.74□□□□□ -1.01
SSD1P24276 PAU21YOR394W 495 nt8.74□□□□□ -1.01
Retrieved 100 of 7,029 protein–RNA pairs in 135.9 ms