Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.51■■■□□ 2.47
TOP1P11387 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
TOP1P11387 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.51■■■□□ 2.47
TOP1P11387 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
TOP1P11387 ST7-AS1-201ENST00000456775 1889 ntBASIC30.5■■■□□ 2.47
TOP1P11387 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
TOP1P11387 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.5■■■□□ 2.47
TOP1P11387 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
TOP1P11387 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
TOP1P11387 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
TOP1P11387 AC127502.1-201ENST00000399971 1502 ntBASIC30.49■■■□□ 2.47
TOP1P11387 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.49■■■□□ 2.47
TOP1P11387 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.49■■■□□ 2.47
TOP1P11387 LINC01971-201ENST00000617888 1048 ntBASIC30.49■■■□□ 2.47
TOP1P11387 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
TOP1P11387 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
TOP1P11387 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
TOP1P11387 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
TOP1P11387 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.46■■■□□ 2.47
TOP1P11387 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
TOP1P11387 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.46■■■□□ 2.47
TOP1P11387 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
TOP1P11387 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
TOP1P11387 LINC00273-201ENST00000539813 1452 ntBASIC30.44■■■□□ 2.46
TOP1P11387 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
TOP1P11387 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
TOP1P11387 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
TOP1P11387 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
TOP1P11387 DUX4L11-201ENST00000611504 1267 ntBASIC30.41■■■□□ 2.46
TOP1P11387 DUX4L12-201ENST00000614593 1267 ntBASIC30.41■■■□□ 2.46
TOP1P11387 DUX4L14-201ENST00000621227 1267 ntBASIC30.41■■■□□ 2.46
TOP1P11387 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
TOP1P11387 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.39■■■□□ 2.46
TOP1P11387 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.38■■■□□ 2.45
TOP1P11387 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.38■■■□□ 2.45
TOP1P11387 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.38■■■□□ 2.45
TOP1P11387 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TOP1P11387 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.37■■■□□ 2.45
TOP1P11387 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
TOP1P11387 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
TOP1P11387 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
TOP1P11387 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.35■■■□□ 2.45
TOP1P11387 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.35■■■□□ 2.45
TOP1P11387 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.34■■■□□ 2.45
TOP1P11387 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.34■■■□□ 2.45
TOP1P11387 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
TOP1P11387 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
TOP1P11387 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.33■■■□□ 2.45
TOP1P11387 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.33■■■□□ 2.45
TOP1P11387 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TOP1P11387 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.32■■■□□ 2.44
TOP1P11387 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
TOP1P11387 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
TOP1P11387 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
TOP1P11387 ABCB10P1-201ENST00000614297 2181 ntBASIC30.3■■■□□ 2.44
TOP1P11387 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.3■■■□□ 2.44
TOP1P11387 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
TOP1P11387 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
TOP1P11387 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
TOP1P11387 MIR3648-2-201ENST00000581792 180 ntBASIC30.29■■■□□ 2.44
TOP1P11387 MIR3648-1-201ENST00000615959 180 ntBASIC30.29■■■□□ 2.44
TOP1P11387 HLA-V-202ENST00000446817 847 ntBASIC30.28■■■□□ 2.44
TOP1P11387 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.28■■■□□ 2.44
TOP1P11387 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.28■■■□□ 2.44
TOP1P11387 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.28■■■□□ 2.44
TOP1P11387 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TOP1P11387 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TOP1P11387 DUX4L13-201ENST00000554103 1267 ntBASIC30.27■■■□□ 2.44
TOP1P11387 DUX4L15-201ENST00000611059 1267 ntBASIC30.27■■■□□ 2.44
TOP1P11387 DUX4L23-201ENST00000615195 1269 ntBASIC30.27■■■□□ 2.44
TOP1P11387 DUX4L24-201ENST00000617576 1269 ntBASIC30.27■■■□□ 2.44
TOP1P11387 DUX4L22-201ENST00000618238 1269 ntBASIC30.27■■■□□ 2.44
TOP1P11387 DUX4L20-201ENST00000619712 1269 ntBASIC30.27■■■□□ 2.44
TOP1P11387 DUX4L21-201ENST00000622058 1269 ntBASIC30.27■■■□□ 2.44
TOP1P11387 DUX4L10-201ENST00000622460 1267 ntBASIC30.27■■■□□ 2.44
TOP1P11387 CR559946.2-201ENST00000623684 991 ntBASIC30.27■■■□□ 2.44
TOP1P11387 DUX4L25-201ENST00000624915 1269 ntBASIC30.27■■■□□ 2.44
TOP1P11387 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.27■■■□□ 2.44
TOP1P11387 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TOP1P11387 AC135983.2-203ENST00000454486 1613 ntBASIC30.26■■■□□ 2.44
TOP1P11387 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
TOP1P11387 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
TOP1P11387 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
TOP1P11387 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
TOP1P11387 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
TOP1P11387 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TOP1P11387 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TOP1P11387 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.25■■■□□ 2.43
TOP1P11387 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
TOP1P11387 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
TOP1P11387 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
TOP1P11387 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TOP1P11387 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.24■■■□□ 2.43
TOP1P11387 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.24■■■□□ 2.43
TOP1P11387 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
TOP1P11387 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.23■■■□□ 2.43
TOP1P11387 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
TOP1P11387 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
TOP1P11387 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
TOP1P11387 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms