Protein–RNA interactions for Protein: P08118

MSMB, Beta-microseminoprotein, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSMBP08118 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MSMBP08118 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.5■■□□□ 1.03
MSMBP08118 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.5■■□□□ 1.03
MSMBP08118 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MSMBP08118 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MSMBP08118 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MSMBP08118 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
MSMBP08118 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.48■■□□□ 1.03
MSMBP08118 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.48■■□□□ 1.03
MSMBP08118 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
MSMBP08118 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.47■■□□□ 1.03
MSMBP08118 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
MSMBP08118 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MSMBP08118 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
MSMBP08118 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MSMBP08118 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MSMBP08118 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.46■■□□□ 1.03
MSMBP08118 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.45■■□□□ 1.03
MSMBP08118 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.45■■□□□ 1.02
MSMBP08118 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MSMBP08118 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MSMBP08118 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.44■■□□□ 1.02
MSMBP08118 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MSMBP08118 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.43■■□□□ 1.02
MSMBP08118 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.43■■□□□ 1.02
MSMBP08118 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
MSMBP08118 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MSMBP08118 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MSMBP08118 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MSMBP08118 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MSMBP08118 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MSMBP08118 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MSMBP08118 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
MSMBP08118 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
MSMBP08118 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
MSMBP08118 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MSMBP08118 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
MSMBP08118 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MSMBP08118 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.39■■□□□ 1.02
MSMBP08118 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MSMBP08118 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
MSMBP08118 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.37■■□□□ 1.01
MSMBP08118 AC127502.1-201ENST00000399971 1502 ntBASIC21.37■■□□□ 1.01
MSMBP08118 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MSMBP08118 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MSMBP08118 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
MSMBP08118 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
MSMBP08118 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.36■■□□□ 1.01
MSMBP08118 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
MSMBP08118 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.36■■□□□ 1.01
MSMBP08118 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.36■■□□□ 1.01
MSMBP08118 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.35■■□□□ 1.01
MSMBP08118 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.35■■□□□ 1.01
MSMBP08118 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.35■■□□□ 1.01
MSMBP08118 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MSMBP08118 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.34■■□□□ 1.01
MSMBP08118 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MSMBP08118 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSMBP08118 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSMBP08118 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
MSMBP08118 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MSMBP08118 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.33■■□□□ 1.01
MSMBP08118 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
MSMBP08118 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
MSMBP08118 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MSMBP08118 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
MSMBP08118 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.32■■□□□ 1
MSMBP08118 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
MSMBP08118 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
MSMBP08118 AL135925.1-201ENST00000605920 1701 ntBASIC21.31■■□□□ 1
MSMBP08118 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.31■■□□□ 1
MSMBP08118 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.3■■□□□ 1
MSMBP08118 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
MSMBP08118 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.29■■□□□ 1
MSMBP08118 AC135983.2-203ENST00000454486 1613 ntBASIC21.29■■□□□ 1
MSMBP08118 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.28■■□□□ 1
MSMBP08118 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.28■■□□□ 1
MSMBP08118 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.28■■□□□ 1
MSMBP08118 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
MSMBP08118 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
MSMBP08118 WHAMMP2-203ENST00000563942 1603 ntBASIC21.27■■□□□ 1
MSMBP08118 AC008813.1-201ENST00000536597 885 ntBASIC21.27■■□□□ 1
MSMBP08118 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
MSMBP08118 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.27■■□□□ 1
MSMBP08118 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
MSMBP08118 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
MSMBP08118 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MSMBP08118 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MSMBP08118 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
MSMBP08118 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MSMBP08118 GPX1-201ENST00000419349 1106 ntBASIC21.25■□□□□ 0.99
MSMBP08118 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
MSMBP08118 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
MSMBP08118 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC21.24■□□□□ 0.99
MSMBP08118 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.24■□□□□ 0.99
MSMBP08118 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MSMBP08118 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.24■□□□□ 0.99
MSMBP08118 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MSMBP08118 RARRES2P2-201ENST00000394842 485 ntBASIC21.23■□□□□ 0.99
MSMBP08118 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms