Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
COL5A2P05997 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC35.19■■■■□ 3.22
COL5A2P05997 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC35.18■■■■□ 3.22
COL5A2P05997 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC35.17■■■■□ 3.22
COL5A2P05997 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
COL5A2P05997 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
COL5A2P05997 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC35.16■■■■□ 3.22
COL5A2P05997 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
COL5A2P05997 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC35.15■■■■□ 3.22
COL5A2P05997 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC35.15■■■■□ 3.22
COL5A2P05997 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
COL5A2P05997 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
COL5A2P05997 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC35.13■■■■□ 3.21
COL5A2P05997 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC35.13■■■■□ 3.21
COL5A2P05997 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC35.12■■■■□ 3.21
COL5A2P05997 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
COL5A2P05997 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC35.11■■■■□ 3.21
COL5A2P05997 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC35.1■■■■□ 3.21
COL5A2P05997 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
COL5A2P05997 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC35.09■■■■□ 3.21
COL5A2P05997 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC35.07■■■■□ 3.21
COL5A2P05997 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC35.07■■■■□ 3.2
COL5A2P05997 CEP120-209ENST00000515110 606 ntTSL 3 BASIC35.07■■■■□ 3.2
COL5A2P05997 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
COL5A2P05997 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
COL5A2P05997 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
COL5A2P05997 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC35.04■■■■□ 3.2
COL5A2P05997 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC35.04■■■■□ 3.2
COL5A2P05997 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC35.04■■■■□ 3.2
COL5A2P05997 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC35.04■■■■□ 3.2
COL5A2P05997 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC35.04■■■■□ 3.2
COL5A2P05997 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
COL5A2P05997 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
COL5A2P05997 NTF6A-201ENST00000591175 560 ntBASIC35.03■■■■□ 3.2
COL5A2P05997 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC35.03■■■■□ 3.2
COL5A2P05997 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
COL5A2P05997 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC35.02■■■■□ 3.2
COL5A2P05997 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC35.02■■■■□ 3.2
COL5A2P05997 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
COL5A2P05997 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC35.02■■■■□ 3.2
COL5A2P05997 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
COL5A2P05997 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
COL5A2P05997 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC35.01■■■■□ 3.2
COL5A2P05997 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC35.01■■■■□ 3.2
COL5A2P05997 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC35■■■■□ 3.19
COL5A2P05997 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC35■■■■□ 3.19
COL5A2P05997 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
COL5A2P05997 AC012354.3-201ENST00000623734 483 ntBASIC34.97■■■■□ 3.19
COL5A2P05997 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC34.95■■■■□ 3.19
COL5A2P05997 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC34.95■■■■□ 3.19
COL5A2P05997 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
COL5A2P05997 AL161658.1-201ENST00000623641 1967 ntBASIC34.94■■■■□ 3.18
COL5A2P05997 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
COL5A2P05997 AC010864.1-201ENST00000609407 1511 ntBASIC34.94■■■■□ 3.18
COL5A2P05997 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
COL5A2P05997 AC022413.1-201ENST00000624602 984 ntBASIC34.92■■■■□ 3.18
COL5A2P05997 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC34.92■■■■□ 3.18
COL5A2P05997 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC34.91■■■■□ 3.18
COL5A2P05997 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
COL5A2P05997 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC34.9■■■■□ 3.18
COL5A2P05997 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
COL5A2P05997 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
COL5A2P05997 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
COL5A2P05997 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC34.88■■■■□ 3.17
COL5A2P05997 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
COL5A2P05997 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
COL5A2P05997 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC34.88■■■■□ 3.17
COL5A2P05997 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC34.88■■■■□ 3.17
COL5A2P05997 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC34.88■■■■□ 3.17
COL5A2P05997 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
COL5A2P05997 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
COL5A2P05997 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC34.87■■■■□ 3.17
COL5A2P05997 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
COL5A2P05997 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
COL5A2P05997 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC34.85■■■■□ 3.17
COL5A2P05997 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
COL5A2P05997 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC34.84■■■■□ 3.17
COL5A2P05997 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
COL5A2P05997 AC008813.1-201ENST00000536597 885 ntBASIC34.83■■■■□ 3.17
COL5A2P05997 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
COL5A2P05997 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
COL5A2P05997 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
COL5A2P05997 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC34.81■■■■□ 3.16
COL5A2P05997 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
COL5A2P05997 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC34.81■■■■□ 3.16
COL5A2P05997 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC34.8■■■■□ 3.16
COL5A2P05997 HES4-202ENST00000428771 1040 ntTSL 2 BASIC34.8■■■■□ 3.16
COL5A2P05997 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC34.79■■■■□ 3.16
COL5A2P05997 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC34.79■■■■□ 3.16
COL5A2P05997 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC34.79■■■■□ 3.16
COL5A2P05997 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
COL5A2P05997 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC34.78■■■■□ 3.16
COL5A2P05997 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC34.78■■■■□ 3.16
COL5A2P05997 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
COL5A2P05997 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
COL5A2P05997 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC34.76■■■■□ 3.16
COL5A2P05997 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC34.76■■■■□ 3.15
COL5A2P05997 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
COL5A2P05997 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC34.75■■■■□ 3.15
COL5A2P05997 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms