Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CHRNA1P02708 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
CHRNA1P02708 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
CHRNA1P02708 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
CHRNA1P02708 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CHRNA1P02708 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CHRNA1P02708 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.72■■■□□ 2.19
CHRNA1P02708 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.72■■■□□ 2.19
CHRNA1P02708 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CHRNA1P02708 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CHRNA1P02708 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CHRNA1P02708 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CHRNA1P02708 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CHRNA1P02708 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CHRNA1P02708 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CHRNA1P02708 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.69■■■□□ 2.18
CHRNA1P02708 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CHRNA1P02708 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.69■■■□□ 2.18
CHRNA1P02708 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.67■■■□□ 2.18
CHRNA1P02708 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.67■■■□□ 2.18
CHRNA1P02708 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CHRNA1P02708 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CHRNA1P02708 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.64■■■□□ 2.18
CHRNA1P02708 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.17
CHRNA1P02708 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CHRNA1P02708 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.63■■■□□ 2.17
CHRNA1P02708 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CHRNA1P02708 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.62■■■□□ 2.17
CHRNA1P02708 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.62■■■□□ 2.17
CHRNA1P02708 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.62■■■□□ 2.17
CHRNA1P02708 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.62■■■□□ 2.17
CHRNA1P02708 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CHRNA1P02708 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CHRNA1P02708 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CHRNA1P02708 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CHRNA1P02708 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CHRNA1P02708 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CHRNA1P02708 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CHRNA1P02708 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
CHRNA1P02708 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
CHRNA1P02708 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
CHRNA1P02708 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.61■■■□□ 2.17
CHRNA1P02708 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
CHRNA1P02708 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
CHRNA1P02708 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
CHRNA1P02708 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.58■■■□□ 2.17
CHRNA1P02708 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.57■■■□□ 2.16
CHRNA1P02708 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.57■■■□□ 2.16
CHRNA1P02708 AC127502.1-201ENST00000399971 1502 ntBASIC28.57■■■□□ 2.16
CHRNA1P02708 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CHRNA1P02708 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
CHRNA1P02708 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CHRNA1P02708 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
CHRNA1P02708 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.54■■■□□ 2.16
CHRNA1P02708 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
CHRNA1P02708 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CHRNA1P02708 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
CHRNA1P02708 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHRNA1P02708 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CHRNA1P02708 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
CHRNA1P02708 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CHRNA1P02708 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.51■■■□□ 2.15
CHRNA1P02708 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
CHRNA1P02708 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CHRNA1P02708 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
CHRNA1P02708 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CHRNA1P02708 AL135925.1-201ENST00000605920 1701 ntBASIC28.5■■■□□ 2.15
CHRNA1P02708 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CHRNA1P02708 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CHRNA1P02708 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.5■■■□□ 2.15
CHRNA1P02708 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.49■■■□□ 2.15
CHRNA1P02708 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
CHRNA1P02708 AC135983.2-203ENST00000454486 1613 ntBASIC28.48■■■□□ 2.15
CHRNA1P02708 WHAMMP2-203ENST00000563942 1603 ntBASIC28.47■■■□□ 2.15
CHRNA1P02708 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CHRNA1P02708 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CHRNA1P02708 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.46■■■□□ 2.15
CHRNA1P02708 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CHRNA1P02708 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.46■■■□□ 2.15
CHRNA1P02708 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CHRNA1P02708 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
CHRNA1P02708 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
CHRNA1P02708 GPX1-201ENST00000419349 1106 ntBASIC28.44■■■□□ 2.14
CHRNA1P02708 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
CHRNA1P02708 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
CHRNA1P02708 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CHRNA1P02708 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CHRNA1P02708 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CHRNA1P02708 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
CHRNA1P02708 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.43■■■□□ 2.14
CHRNA1P02708 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.43■■■□□ 2.14
CHRNA1P02708 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.42■■■□□ 2.14
CHRNA1P02708 RARRES2P2-201ENST00000394842 485 ntBASIC28.42■■■□□ 2.14
CHRNA1P02708 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
CHRNA1P02708 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
CHRNA1P02708 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
CHRNA1P02708 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.41■■■□□ 2.14
CHRNA1P02708 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.41■■■□□ 2.14
CHRNA1P02708 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
CHRNA1P02708 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.4■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms