Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
CLDN1O95832 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CLDN1O95832 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.24■■□□□ 1.31
CLDN1O95832 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLDN1O95832 AC018358.1-201ENST00000631079 1402 ntBASIC23.24■■□□□ 1.31
CLDN1O95832 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLDN1O95832 AL033527.3-201ENST00000566366 1196 ntBASIC23.23■■□□□ 1.31
CLDN1O95832 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC23.23■■□□□ 1.31
CLDN1O95832 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.22■■□□□ 1.31
CLDN1O95832 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
CLDN1O95832 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLDN1O95832 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CLDN1O95832 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.21■■□□□ 1.31
CLDN1O95832 AC008813.1-201ENST00000536597 885 ntBASIC23.21■■□□□ 1.31
CLDN1O95832 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.21■■□□□ 1.31
CLDN1O95832 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.21■■□□□ 1.31
CLDN1O95832 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
CLDN1O95832 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLDN1O95832 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLDN1O95832 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CLDN1O95832 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLDN1O95832 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CLDN1O95832 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLDN1O95832 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CLDN1O95832 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLDN1O95832 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CLDN1O95832 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CLDN1O95832 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLDN1O95832 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.18■■□□□ 1.3
CLDN1O95832 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.18■■□□□ 1.3
CLDN1O95832 AC022413.1-201ENST00000624602 984 ntBASIC23.18■■□□□ 1.3
CLDN1O95832 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.18■■□□□ 1.3
CLDN1O95832 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.18■■□□□ 1.3
CLDN1O95832 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.17■■□□□ 1.3
CLDN1O95832 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN1O95832 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CLDN1O95832 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CLDN1O95832 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN1O95832 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN1O95832 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
CLDN1O95832 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN1O95832 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CLDN1O95832 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN1O95832 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.11■■□□□ 1.29
CLDN1O95832 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLDN1O95832 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLDN1O95832 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLDN1O95832 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLDN1O95832 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN1O95832 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.08■■□□□ 1.29
CLDN1O95832 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.08■■□□□ 1.29
CLDN1O95832 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLDN1O95832 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLDN1O95832 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CLDN1O95832 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN1O95832 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN1O95832 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN1O95832 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.07■■□□□ 1.28
CLDN1O95832 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN1O95832 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.06■■□□□ 1.28
CLDN1O95832 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLDN1O95832 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.06■■□□□ 1.28
CLDN1O95832 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.06■■□□□ 1.28
CLDN1O95832 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLDN1O95832 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.05■■□□□ 1.28
CLDN1O95832 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CLDN1O95832 U85056.1-201ENST00000616429 682 ntBASIC23.05■■□□□ 1.28
CLDN1O95832 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.05■■□□□ 1.28
CLDN1O95832 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLDN1O95832 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CLDN1O95832 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.04■■□□□ 1.28
CLDN1O95832 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.04■■□□□ 1.28
CLDN1O95832 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CLDN1O95832 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.03■■□□□ 1.28
CLDN1O95832 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
CLDN1O95832 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.02■■□□□ 1.28
CLDN1O95832 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.02■■□□□ 1.28
CLDN1O95832 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLDN1O95832 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLDN1O95832 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CLDN1O95832 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.01■■□□□ 1.27
CLDN1O95832 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC23■■□□□ 1.27
CLDN1O95832 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23■■□□□ 1.27
CLDN1O95832 RARRES2P1-201ENST00000474487 481 ntBASIC23■■□□□ 1.27
CLDN1O95832 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLDN1O95832 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLDN1O95832 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.99■■□□□ 1.27
CLDN1O95832 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLDN1O95832 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.98■■□□□ 1.27
CLDN1O95832 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.98■■□□□ 1.27
CLDN1O95832 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN1O95832 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
CLDN1O95832 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN1O95832 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN1O95832 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN1O95832 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.98■■□□□ 1.27
CLDN1O95832 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC22.97■■□□□ 1.27
CLDN1O95832 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CLDN1O95832 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CLDN1O95832 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms