Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
BEST1O76090 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
BEST1O76090 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
BEST1O76090 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.48■■□□□ 1.99
BEST1O76090 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.48■■□□□ 1.99
BEST1O76090 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.48■■□□□ 1.99
BEST1O76090 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
BEST1O76090 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
BEST1O76090 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.47■■□□□ 1.99
BEST1O76090 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
BEST1O76090 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.47■■□□□ 1.99
BEST1O76090 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
BEST1O76090 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
BEST1O76090 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.45■■□□□ 1.99
BEST1O76090 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.45■■□□□ 1.98
BEST1O76090 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.98
BEST1O76090 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
BEST1O76090 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
BEST1O76090 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.44■■□□□ 1.98
BEST1O76090 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.43■■□□□ 1.98
BEST1O76090 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.43■■□□□ 1.98
BEST1O76090 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
BEST1O76090 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.43■■□□□ 1.98
BEST1O76090 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.43■■□□□ 1.98
BEST1O76090 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
BEST1O76090 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.42■■□□□ 1.98
BEST1O76090 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.42■■□□□ 1.98
BEST1O76090 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
BEST1O76090 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
BEST1O76090 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
BEST1O76090 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
BEST1O76090 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
BEST1O76090 LINC00273-201ENST00000539813 1452 ntBASIC27.4■■□□□ 1.98
BEST1O76090 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
BEST1O76090 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
BEST1O76090 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
BEST1O76090 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
BEST1O76090 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.37■■□□□ 1.97
BEST1O76090 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.37■■□□□ 1.97
BEST1O76090 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
BEST1O76090 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.36■■□□□ 1.97
BEST1O76090 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
BEST1O76090 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
BEST1O76090 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
BEST1O76090 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
BEST1O76090 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
BEST1O76090 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.35■■□□□ 1.97
BEST1O76090 LINC01971-201ENST00000617888 1048 ntBASIC27.35■■□□□ 1.97
BEST1O76090 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
BEST1O76090 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
BEST1O76090 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
BEST1O76090 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
BEST1O76090 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
BEST1O76090 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
BEST1O76090 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
BEST1O76090 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
BEST1O76090 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
BEST1O76090 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.96
BEST1O76090 DUX4L11-201ENST00000611504 1267 ntBASIC27.32■■□□□ 1.96
BEST1O76090 DUX4L12-201ENST00000614593 1267 ntBASIC27.32■■□□□ 1.96
BEST1O76090 DUX4L14-201ENST00000621227 1267 ntBASIC27.32■■□□□ 1.96
BEST1O76090 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
BEST1O76090 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
BEST1O76090 AC135983.2-203ENST00000454486 1613 ntBASIC27.31■■□□□ 1.96
BEST1O76090 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
BEST1O76090 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
BEST1O76090 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
BEST1O76090 WHAMMP2-203ENST00000563942 1603 ntBASIC27.3■■□□□ 1.96
BEST1O76090 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
BEST1O76090 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
BEST1O76090 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
BEST1O76090 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.27■■□□□ 1.96
BEST1O76090 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.26■■□□□ 1.95
BEST1O76090 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
BEST1O76090 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
BEST1O76090 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
BEST1O76090 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.24■■□□□ 1.95
BEST1O76090 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.24■■□□□ 1.95
BEST1O76090 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
BEST1O76090 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.24■■□□□ 1.95
BEST1O76090 AL139393.2-201ENST00000608721 2025 ntBASIC27.24■■□□□ 1.95
BEST1O76090 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.24■■□□□ 1.95
BEST1O76090 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.24■■□□□ 1.95
BEST1O76090 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
BEST1O76090 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.23■■□□□ 1.95
BEST1O76090 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
BEST1O76090 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
BEST1O76090 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.21■■□□□ 1.95
BEST1O76090 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.21■■□□□ 1.95
BEST1O76090 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
BEST1O76090 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.2■■□□□ 1.94
BEST1O76090 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.2■■□□□ 1.94
BEST1O76090 MIR3648-2-201ENST00000581792 180 ntBASIC27.2■■□□□ 1.94
BEST1O76090 MIR3648-1-201ENST00000615959 180 ntBASIC27.2■■□□□ 1.94
BEST1O76090 CR559946.2-201ENST00000623684 991 ntBASIC27.2■■□□□ 1.94
BEST1O76090 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.19■■□□□ 1.94
BEST1O76090 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.19■■□□□ 1.94
BEST1O76090 DUX4L13-201ENST00000554103 1267 ntBASIC27.19■■□□□ 1.94
BEST1O76090 DUX4L15-201ENST00000611059 1267 ntBASIC27.19■■□□□ 1.94
BEST1O76090 DUX4L23-201ENST00000615195 1269 ntBASIC27.19■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms