Protein–RNA interactions for Protein: O75556

SCGB2A1, Mammaglobin-B, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A1O75556 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCGB2A1O75556 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SCGB2A1O75556 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCGB2A1O75556 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCGB2A1O75556 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCGB2A1O75556 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCGB2A1O75556 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCGB2A1O75556 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCGB2A1O75556 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCGB2A1O75556 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCGB2A1O75556 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCGB2A1O75556 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCGB2A1O75556 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCGB2A1O75556 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCGB2A1O75556 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCGB2A1O75556 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SCGB2A1O75556 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
SCGB2A1O75556 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCGB2A1O75556 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCGB2A1O75556 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
SCGB2A1O75556 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCGB2A1O75556 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SCGB2A1O75556 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCGB2A1O75556 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCGB2A1O75556 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCGB2A1O75556 AC139426.1-201ENST00000568218 2529 ntBASIC20.25■□□□□ 0.83
SCGB2A1O75556 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCGB2A1O75556 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCGB2A1O75556 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCGB2A1O75556 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCGB2A1O75556 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.23■□□□□ 0.83
SCGB2A1O75556 AL139393.2-201ENST00000608721 2025 ntBASIC20.23■□□□□ 0.83
SCGB2A1O75556 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCGB2A1O75556 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SCGB2A1O75556 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCGB2A1O75556 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.22■□□□□ 0.83
SCGB2A1O75556 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCGB2A1O75556 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCGB2A1O75556 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SCGB2A1O75556 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.2■□□□□ 0.82
SCGB2A1O75556 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCGB2A1O75556 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.19■□□□□ 0.82
SCGB2A1O75556 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.19■□□□□ 0.82
SCGB2A1O75556 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.19■□□□□ 0.82
SCGB2A1O75556 AC136428.2-201ENST00000563187 214 ntBASIC20.19■□□□□ 0.82
SCGB2A1O75556 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.19■□□□□ 0.82
SCGB2A1O75556 AC142086.6-201ENST00000621154 1765 ntBASIC20.18■□□□□ 0.82
SCGB2A1O75556 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCGB2A1O75556 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCGB2A1O75556 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SCGB2A1O75556 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCGB2A1O75556 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCGB2A1O75556 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCGB2A1O75556 AP004833.2-201ENST00000532228 1454 ntBASIC20.18■□□□□ 0.82
SCGB2A1O75556 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCGB2A1O75556 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCGB2A1O75556 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCGB2A1O75556 CAHM-201ENST00000604200 896 ntBASIC20.16■□□□□ 0.82
SCGB2A1O75556 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCGB2A1O75556 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SCGB2A1O75556 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SCGB2A1O75556 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SCGB2A1O75556 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SCGB2A1O75556 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCGB2A1O75556 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.14■□□□□ 0.81
SCGB2A1O75556 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.14■□□□□ 0.81
SCGB2A1O75556 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SCGB2A1O75556 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCGB2A1O75556 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.13■□□□□ 0.81
SCGB2A1O75556 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SCGB2A1O75556 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.12■□□□□ 0.81
SCGB2A1O75556 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCGB2A1O75556 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.12■□□□□ 0.81
SCGB2A1O75556 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.12■□□□□ 0.81
SCGB2A1O75556 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SCGB2A1O75556 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCGB2A1O75556 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCGB2A1O75556 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.11■□□□□ 0.81
SCGB2A1O75556 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCGB2A1O75556 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCGB2A1O75556 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCGB2A1O75556 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCGB2A1O75556 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCGB2A1O75556 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SCGB2A1O75556 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SCGB2A1O75556 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.1■□□□□ 0.81
SCGB2A1O75556 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SCGB2A1O75556 MIR762-201ENST00000390236 83 ntBASIC20.09■□□□□ 0.81
SCGB2A1O75556 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCGB2A1O75556 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SCGB2A1O75556 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCGB2A1O75556 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.08■□□□□ 0.81
SCGB2A1O75556 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.08■□□□□ 0.8
SCGB2A1O75556 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SCGB2A1O75556 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SCGB2A1O75556 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCGB2A1O75556 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SCGB2A1O75556 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SCGB2A1O75556 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
SCGB2A1O75556 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms