Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF253O75346 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF253O75346 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF253O75346 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF253O75346 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ZNF253O75346 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.94■□□□□ 0.78
ZNF253O75346 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF253O75346 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF253O75346 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF253O75346 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.93■□□□□ 0.78
ZNF253O75346 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF253O75346 AL139393.2-201ENST00000608721 2025 ntBASIC19.92■□□□□ 0.78
ZNF253O75346 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ZNF253O75346 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF253O75346 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF253O75346 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF253O75346 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
ZNF253O75346 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF253O75346 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF253O75346 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF253O75346 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF253O75346 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ZNF253O75346 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF253O75346 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
ZNF253O75346 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF253O75346 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF253O75346 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF253O75346 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ZNF253O75346 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF253O75346 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ZNF253O75346 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ZNF253O75346 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF253O75346 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF253O75346 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF253O75346 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF253O75346 AC010864.1-201ENST00000609407 1511 ntBASIC19.86■□□□□ 0.77
ZNF253O75346 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ZNF253O75346 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF253O75346 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF253O75346 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF253O75346 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF253O75346 AL121749.1-202ENST00000609313 2153 ntBASIC19.84■□□□□ 0.77
ZNF253O75346 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF253O75346 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ZNF253O75346 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF253O75346 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ZNF253O75346 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.82■□□□□ 0.76
ZNF253O75346 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF253O75346 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ZNF253O75346 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
ZNF253O75346 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF253O75346 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.81■□□□□ 0.76
ZNF253O75346 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ZNF253O75346 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF253O75346 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ZNF253O75346 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF253O75346 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF253O75346 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF253O75346 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF253O75346 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
ZNF253O75346 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF253O75346 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.79■□□□□ 0.76
ZNF253O75346 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF253O75346 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF253O75346 DRD5P2-201ENST00000421395 2012 ntBASIC19.78■□□□□ 0.76
ZNF253O75346 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF253O75346 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.77■□□□□ 0.76
ZNF253O75346 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF253O75346 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF253O75346 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF253O75346 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF253O75346 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF253O75346 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.76■□□□□ 0.75
ZNF253O75346 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.76■□□□□ 0.75
ZNF253O75346 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ZNF253O75346 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF253O75346 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF253O75346 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
ZNF253O75346 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF253O75346 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF253O75346 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF253O75346 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF253O75346 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ZNF253O75346 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF253O75346 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF253O75346 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF253O75346 AP004833.2-201ENST00000532228 1454 ntBASIC19.73■□□□□ 0.75
ZNF253O75346 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF253O75346 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF253O75346 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF253O75346 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF253O75346 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ZNF253O75346 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF253O75346 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF253O75346 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF253O75346 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF253O75346 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF253O75346 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNF253O75346 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNF253O75346 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms