Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
DLX3O60479 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
DLX3O60479 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.67
DLX3O60479 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
DLX3O60479 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
DLX3O60479 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
DLX3O60479 CAHM-201ENST00000604200 896 ntBASIC25.45■■□□□ 1.66
DLX3O60479 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
DLX3O60479 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
DLX3O60479 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.44■■□□□ 1.66
DLX3O60479 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
DLX3O60479 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.44■■□□□ 1.66
DLX3O60479 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
DLX3O60479 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
DLX3O60479 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.42■■□□□ 1.66
DLX3O60479 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
DLX3O60479 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
DLX3O60479 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DLX3O60479 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DLX3O60479 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.4■■□□□ 1.66
DLX3O60479 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DLX3O60479 AP004833.2-201ENST00000532228 1454 ntBASIC25.4■■□□□ 1.66
DLX3O60479 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
DLX3O60479 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
DLX3O60479 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
DLX3O60479 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
DLX3O60479 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.38■■□□□ 1.65
DLX3O60479 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.38■■□□□ 1.65
DLX3O60479 AC136428.2-201ENST00000563187 214 ntBASIC25.38■■□□□ 1.65
DLX3O60479 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
DLX3O60479 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
DLX3O60479 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
DLX3O60479 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.38■■□□□ 1.65
DLX3O60479 AC127502.1-201ENST00000399971 1502 ntBASIC25.37■■□□□ 1.65
DLX3O60479 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.37■■□□□ 1.65
DLX3O60479 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.37■■□□□ 1.65
DLX3O60479 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
DLX3O60479 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
DLX3O60479 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
DLX3O60479 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
DLX3O60479 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
DLX3O60479 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
DLX3O60479 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DLX3O60479 AL121749.1-202ENST00000609313 2153 ntBASIC25.34■■□□□ 1.65
DLX3O60479 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.34■■□□□ 1.65
DLX3O60479 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
DLX3O60479 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
DLX3O60479 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DLX3O60479 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
DLX3O60479 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
DLX3O60479 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.33■■□□□ 1.65
DLX3O60479 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
DLX3O60479 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
DLX3O60479 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
DLX3O60479 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.64
DLX3O60479 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DLX3O60479 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DLX3O60479 AC097358.2-201ENST00000607541 1159 ntBASIC25.32■■□□□ 1.64
DLX3O60479 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
DLX3O60479 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
DLX3O60479 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
DLX3O60479 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
DLX3O60479 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.31■■□□□ 1.64
DLX3O60479 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
DLX3O60479 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
DLX3O60479 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
DLX3O60479 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
DLX3O60479 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.29■■□□□ 1.64
DLX3O60479 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
DLX3O60479 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
DLX3O60479 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
DLX3O60479 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.27■■□□□ 1.64
DLX3O60479 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
DLX3O60479 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DLX3O60479 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
DLX3O60479 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.26■■□□□ 1.63
DLX3O60479 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
DLX3O60479 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
DLX3O60479 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
DLX3O60479 BX255925.1-201ENST00000566954 1854 ntBASIC25.26■■□□□ 1.63
DLX3O60479 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.25■■□□□ 1.63
DLX3O60479 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
DLX3O60479 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DLX3O60479 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DLX3O60479 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DLX3O60479 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
DLX3O60479 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
DLX3O60479 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
DLX3O60479 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
DLX3O60479 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
DLX3O60479 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DLX3O60479 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.21■■□□□ 1.63
DLX3O60479 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.21■■□□□ 1.63
DLX3O60479 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
DLX3O60479 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
DLX3O60479 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
DLX3O60479 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
DLX3O60479 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.2■■□□□ 1.62
DLX3O60479 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.2■■□□□ 1.62
DLX3O60479 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms