Protein–RNA interactions for Protein: A6NNJ1

FAM90A9P, Putative protein FAM90A9P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A9PA6NNJ1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FAM90A9PA6NNJ1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.2■□□□□ 0.98
FAM90A9PA6NNJ1 RPS2P35-201ENST00000443417 897 ntBASIC21.2■□□□□ 0.98
FAM90A9PA6NNJ1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FAM90A9PA6NNJ1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FAM90A9PA6NNJ1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.2■□□□□ 0.98
FAM90A9PA6NNJ1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FAM90A9PA6NNJ1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
FAM90A9PA6NNJ1 AL139393.2-201ENST00000608721 2025 ntBASIC21.19■□□□□ 0.98
FAM90A9PA6NNJ1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
FAM90A9PA6NNJ1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
FAM90A9PA6NNJ1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FAM90A9PA6NNJ1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FAM90A9PA6NNJ1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FAM90A9PA6NNJ1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
FAM90A9PA6NNJ1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
FAM90A9PA6NNJ1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FAM90A9PA6NNJ1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
FAM90A9PA6NNJ1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FAM90A9PA6NNJ1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FAM90A9PA6NNJ1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
FAM90A9PA6NNJ1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.17■□□□□ 0.98
FAM90A9PA6NNJ1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FAM90A9PA6NNJ1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FAM90A9PA6NNJ1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FAM90A9PA6NNJ1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FAM90A9PA6NNJ1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FAM90A9PA6NNJ1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FAM90A9PA6NNJ1 AC010864.1-201ENST00000609407 1511 ntBASIC21.15■□□□□ 0.98
FAM90A9PA6NNJ1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
FAM90A9PA6NNJ1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
FAM90A9PA6NNJ1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
FAM90A9PA6NNJ1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.13■□□□□ 0.97
FAM90A9PA6NNJ1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.13■□□□□ 0.97
FAM90A9PA6NNJ1 AC044849.2-201ENST00000606596 710 ntBASIC21.13■□□□□ 0.97
FAM90A9PA6NNJ1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
FAM90A9PA6NNJ1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.13■□□□□ 0.97
FAM90A9PA6NNJ1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FAM90A9PA6NNJ1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FAM90A9PA6NNJ1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.12■□□□□ 0.97
FAM90A9PA6NNJ1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FAM90A9PA6NNJ1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FAM90A9PA6NNJ1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.1■□□□□ 0.97
FAM90A9PA6NNJ1 AC108673.1-201ENST00000510422 1159 ntBASIC21.1■□□□□ 0.97
FAM90A9PA6NNJ1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FAM90A9PA6NNJ1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
FAM90A9PA6NNJ1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FAM90A9PA6NNJ1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FAM90A9PA6NNJ1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
FAM90A9PA6NNJ1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FAM90A9PA6NNJ1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FAM90A9PA6NNJ1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FAM90A9PA6NNJ1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.07■□□□□ 0.96
FAM90A9PA6NNJ1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FAM90A9PA6NNJ1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
FAM90A9PA6NNJ1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
FAM90A9PA6NNJ1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.06■□□□□ 0.96
FAM90A9PA6NNJ1 DRD5P2-201ENST00000421395 2012 ntBASIC21.05■□□□□ 0.96
FAM90A9PA6NNJ1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
FAM90A9PA6NNJ1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FAM90A9PA6NNJ1 MIR6090-201ENST00000622481 60 ntBASIC21.05■□□□□ 0.96
FAM90A9PA6NNJ1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FAM90A9PA6NNJ1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
FAM90A9PA6NNJ1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
FAM90A9PA6NNJ1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FAM90A9PA6NNJ1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
FAM90A9PA6NNJ1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FAM90A9PA6NNJ1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FAM90A9PA6NNJ1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.04■□□□□ 0.96
FAM90A9PA6NNJ1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FAM90A9PA6NNJ1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FAM90A9PA6NNJ1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
FAM90A9PA6NNJ1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
FAM90A9PA6NNJ1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FAM90A9PA6NNJ1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.02■□□□□ 0.96
FAM90A9PA6NNJ1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.01■□□□□ 0.95
FAM90A9PA6NNJ1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FAM90A9PA6NNJ1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
FAM90A9PA6NNJ1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
FAM90A9PA6NNJ1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FAM90A9PA6NNJ1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
FAM90A9PA6NNJ1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FAM90A9PA6NNJ1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
FAM90A9PA6NNJ1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FAM90A9PA6NNJ1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
FAM90A9PA6NNJ1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FAM90A9PA6NNJ1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FAM90A9PA6NNJ1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.98■□□□□ 0.95
FAM90A9PA6NNJ1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.98■□□□□ 0.95
FAM90A9PA6NNJ1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FAM90A9PA6NNJ1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM90A9PA6NNJ1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM90A9PA6NNJ1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM90A9PA6NNJ1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.96■□□□□ 0.95
FAM90A9PA6NNJ1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.96■□□□□ 0.95
FAM90A9PA6NNJ1 AP004833.2-201ENST00000532228 1454 ntBASIC20.95■□□□□ 0.94
FAM90A9PA6NNJ1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.95■□□□□ 0.94
FAM90A9PA6NNJ1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.95■□□□□ 0.94
FAM90A9PA6NNJ1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.95■□□□□ 0.94
FAM90A9PA6NNJ1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms