Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
HTR3EA5X5Y0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.7■■□□□ 1.38
HTR3EA5X5Y0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HTR3EA5X5Y0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HTR3EA5X5Y0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
HTR3EA5X5Y0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HTR3EA5X5Y0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
HTR3EA5X5Y0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HTR3EA5X5Y0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HTR3EA5X5Y0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.67■■□□□ 1.38
HTR3EA5X5Y0 AL139393.2-201ENST00000608721 2025 ntBASIC23.67■■□□□ 1.38
HTR3EA5X5Y0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
HTR3EA5X5Y0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
HTR3EA5X5Y0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.67■■□□□ 1.38
HTR3EA5X5Y0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HTR3EA5X5Y0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HTR3EA5X5Y0 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HTR3EA5X5Y0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HTR3EA5X5Y0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
HTR3EA5X5Y0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HTR3EA5X5Y0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HTR3EA5X5Y0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HTR3EA5X5Y0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HTR3EA5X5Y0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
HTR3EA5X5Y0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
HTR3EA5X5Y0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.65■■□□□ 1.38
HTR3EA5X5Y0 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HTR3EA5X5Y0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HTR3EA5X5Y0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
HTR3EA5X5Y0 CAHM-201ENST00000604200 896 ntBASIC23.64■■□□□ 1.37
HTR3EA5X5Y0 AC097358.2-201ENST00000607541 1159 ntBASIC23.64■■□□□ 1.37
HTR3EA5X5Y0 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.64■■□□□ 1.37
HTR3EA5X5Y0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.63■■□□□ 1.37
HTR3EA5X5Y0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HTR3EA5X5Y0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.63■■□□□ 1.37
HTR3EA5X5Y0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.63■■□□□ 1.37
HTR3EA5X5Y0 AC136428.2-201ENST00000563187 214 ntBASIC23.62■■□□□ 1.37
HTR3EA5X5Y0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HTR3EA5X5Y0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
HTR3EA5X5Y0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
HTR3EA5X5Y0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.61■■□□□ 1.37
HTR3EA5X5Y0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
HTR3EA5X5Y0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.61■■□□□ 1.37
HTR3EA5X5Y0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
HTR3EA5X5Y0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
HTR3EA5X5Y0 AP004833.2-201ENST00000532228 1454 ntBASIC23.61■■□□□ 1.37
HTR3EA5X5Y0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HTR3EA5X5Y0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.6■■□□□ 1.37
HTR3EA5X5Y0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HTR3EA5X5Y0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.6■■□□□ 1.37
HTR3EA5X5Y0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.6■■□□□ 1.37
HTR3EA5X5Y0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HTR3EA5X5Y0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
HTR3EA5X5Y0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
HTR3EA5X5Y0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
HTR3EA5X5Y0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.58■■□□□ 1.37
HTR3EA5X5Y0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
HTR3EA5X5Y0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
HTR3EA5X5Y0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
HTR3EA5X5Y0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
HTR3EA5X5Y0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.57■■□□□ 1.36
HTR3EA5X5Y0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
HTR3EA5X5Y0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.57■■□□□ 1.36
HTR3EA5X5Y0 AC142086.6-201ENST00000621154 1765 ntBASIC23.56■■□□□ 1.36
HTR3EA5X5Y0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
HTR3EA5X5Y0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.56■■□□□ 1.36
HTR3EA5X5Y0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
HTR3EA5X5Y0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
HTR3EA5X5Y0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
HTR3EA5X5Y0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
HTR3EA5X5Y0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HTR3EA5X5Y0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
HTR3EA5X5Y0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HTR3EA5X5Y0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HTR3EA5X5Y0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
HTR3EA5X5Y0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HTR3EA5X5Y0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
HTR3EA5X5Y0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HTR3EA5X5Y0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
HTR3EA5X5Y0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
HTR3EA5X5Y0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HTR3EA5X5Y0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
HTR3EA5X5Y0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
HTR3EA5X5Y0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
HTR3EA5X5Y0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
HTR3EA5X5Y0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
HTR3EA5X5Y0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.48■■□□□ 1.35
HTR3EA5X5Y0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HTR3EA5X5Y0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.48■■□□□ 1.35
HTR3EA5X5Y0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.48■■□□□ 1.35
HTR3EA5X5Y0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HTR3EA5X5Y0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
HTR3EA5X5Y0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.48■■□□□ 1.35
HTR3EA5X5Y0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HTR3EA5X5Y0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HTR3EA5X5Y0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.47■■□□□ 1.35
HTR3EA5X5Y0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
HTR3EA5X5Y0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
HTR3EA5X5Y0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
HTR3EA5X5Y0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms