Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAV13-2A0A0B4J235 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAV13-2A0A0B4J235 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV13-2A0A0B4J235 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV13-2A0A0B4J235 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRAV13-2A0A0B4J235 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV13-2A0A0B4J235 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV13-2A0A0B4J235 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV13-2A0A0B4J235 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV13-2A0A0B4J235 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV13-2A0A0B4J235 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV13-2A0A0B4J235 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAV13-2A0A0B4J235 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
TRAV13-2A0A0B4J235 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV13-2A0A0B4J235 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV13-2A0A0B4J235 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV13-2A0A0B4J235 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV13-2A0A0B4J235 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV13-2A0A0B4J235 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV13-2A0A0B4J235 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV13-2A0A0B4J235 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV13-2A0A0B4J235 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV13-2A0A0B4J235 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV13-2A0A0B4J235 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV13-2A0A0B4J235 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
TRAV13-2A0A0B4J235 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV13-2A0A0B4J235 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRAV13-2A0A0B4J235 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV13-2A0A0B4J235 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV13-2A0A0B4J235 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV13-2A0A0B4J235 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV13-2A0A0B4J235 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV13-2A0A0B4J235 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV13-2A0A0B4J235 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV13-2A0A0B4J235 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV13-2A0A0B4J235 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV13-2A0A0B4J235 BX255925.1-201ENST00000566954 1854 ntBASIC17.03■□□□□ 0.32
TRAV13-2A0A0B4J235 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
TRAV13-2A0A0B4J235 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV13-2A0A0B4J235 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV13-2A0A0B4J235 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
TRAV13-2A0A0B4J235 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TRAV13-2A0A0B4J235 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRAV13-2A0A0B4J235 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV13-2A0A0B4J235 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRAV13-2A0A0B4J235 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV13-2A0A0B4J235 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV13-2A0A0B4J235 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV13-2A0A0B4J235 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV13-2A0A0B4J235 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV13-2A0A0B4J235 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV13-2A0A0B4J235 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRAV13-2A0A0B4J235 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
TRAV13-2A0A0B4J235 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV13-2A0A0B4J235 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV13-2A0A0B4J235 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV13-2A0A0B4J235 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
TRAV13-2A0A0B4J235 SHF-208ENST00000560734 1731 ntTSL 3 BASIC16.98■□□□□ 0.31
TRAV13-2A0A0B4J235 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV13-2A0A0B4J235 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRAV13-2A0A0B4J235 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TRAV13-2A0A0B4J235 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV13-2A0A0B4J235 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRAV13-2A0A0B4J235 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV13-2A0A0B4J235 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV13-2A0A0B4J235 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV13-2A0A0B4J235 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV13-2A0A0B4J235 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TRAV13-2A0A0B4J235 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV13-2A0A0B4J235 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV13-2A0A0B4J235 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV13-2A0A0B4J235 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV13-2A0A0B4J235 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV13-2A0A0B4J235 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV13-2A0A0B4J235 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV13-2A0A0B4J235 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV13-2A0A0B4J235 AL449106.1-201ENST00000608517 1980 ntBASIC16.95■□□□□ 0.3
TRAV13-2A0A0B4J235 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV13-2A0A0B4J235 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV13-2A0A0B4J235 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV13-2A0A0B4J235 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV13-2A0A0B4J235 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV13-2A0A0B4J235 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV13-2A0A0B4J235 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV13-2A0A0B4J235 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV13-2A0A0B4J235 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV13-2A0A0B4J235 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV13-2A0A0B4J235 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV13-2A0A0B4J235 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV13-2A0A0B4J235 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV13-2A0A0B4J235 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV13-2A0A0B4J235 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV13-2A0A0B4J235 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV13-2A0A0B4J235 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRAV13-2A0A0B4J235 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV13-2A0A0B4J235 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV13-2A0A0B4J235 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV13-2A0A0B4J235 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV13-2A0A0B4J235 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV13-2A0A0B4J235 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms