Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TRAV19A0A0A6YYK7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.16■■□□□ 1.94
TRAV19A0A0A6YYK7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.16■■□□□ 1.94
TRAV19A0A0A6YYK7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TRAV19A0A0A6YYK7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TRAV19A0A0A6YYK7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.15■■□□□ 1.94
TRAV19A0A0A6YYK7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
TRAV19A0A0A6YYK7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TRAV19A0A0A6YYK7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.14■■□□□ 1.94
TRAV19A0A0A6YYK7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
TRAV19A0A0A6YYK7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TRAV19A0A0A6YYK7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TRAV19A0A0A6YYK7 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.12■■□□□ 1.93
TRAV19A0A0A6YYK7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
TRAV19A0A0A6YYK7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
TRAV19A0A0A6YYK7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
TRAV19A0A0A6YYK7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TRAV19A0A0A6YYK7 AL135925.1-201ENST00000605920 1701 ntBASIC27.09■■□□□ 1.93
TRAV19A0A0A6YYK7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
TRAV19A0A0A6YYK7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.08■■□□□ 1.93
TRAV19A0A0A6YYK7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
TRAV19A0A0A6YYK7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
TRAV19A0A0A6YYK7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.07■■□□□ 1.92
TRAV19A0A0A6YYK7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.07■■□□□ 1.92
TRAV19A0A0A6YYK7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
TRAV19A0A0A6YYK7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
TRAV19A0A0A6YYK7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.05■■□□□ 1.92
TRAV19A0A0A6YYK7 AC127502.1-201ENST00000399971 1502 ntBASIC27.05■■□□□ 1.92
TRAV19A0A0A6YYK7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
TRAV19A0A0A6YYK7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.04■■□□□ 1.92
TRAV19A0A0A6YYK7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.04■■□□□ 1.92
TRAV19A0A0A6YYK7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
TRAV19A0A0A6YYK7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.03■■□□□ 1.92
TRAV19A0A0A6YYK7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
TRAV19A0A0A6YYK7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
TRAV19A0A0A6YYK7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.02■■□□□ 1.92
TRAV19A0A0A6YYK7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
TRAV19A0A0A6YYK7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.01■■□□□ 1.91
TRAV19A0A0A6YYK7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27■■□□□ 1.91
TRAV19A0A0A6YYK7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
TRAV19A0A0A6YYK7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27■■□□□ 1.91
TRAV19A0A0A6YYK7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
TRAV19A0A0A6YYK7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.99■■□□□ 1.91
TRAV19A0A0A6YYK7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
TRAV19A0A0A6YYK7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
TRAV19A0A0A6YYK7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
TRAV19A0A0A6YYK7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
TRAV19A0A0A6YYK7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
TRAV19A0A0A6YYK7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.95■■□□□ 1.9
TRAV19A0A0A6YYK7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
TRAV19A0A0A6YYK7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRAV19A0A0A6YYK7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRAV19A0A0A6YYK7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRAV19A0A0A6YYK7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRAV19A0A0A6YYK7 HSD17B1P1-201ENST00000590052 955 ntBASIC26.92■■□□□ 1.9
TRAV19A0A0A6YYK7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
TRAV19A0A0A6YYK7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TRAV19A0A0A6YYK7 AC135983.2-203ENST00000454486 1613 ntBASIC26.91■■□□□ 1.9
TRAV19A0A0A6YYK7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
TRAV19A0A0A6YYK7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.91■■□□□ 1.9
TRAV19A0A0A6YYK7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.91■■□□□ 1.9
TRAV19A0A0A6YYK7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
TRAV19A0A0A6YYK7 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.89■■□□□ 1.9
TRAV19A0A0A6YYK7 WHAMMP2-203ENST00000563942 1603 ntBASIC26.89■■□□□ 1.9
TRAV19A0A0A6YYK7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
TRAV19A0A0A6YYK7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.88■■□□□ 1.89
TRAV19A0A0A6YYK7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TRAV19A0A0A6YYK7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
TRAV19A0A0A6YYK7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
TRAV19A0A0A6YYK7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.87■■□□□ 1.89
TRAV19A0A0A6YYK7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
TRAV19A0A0A6YYK7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.87■■□□□ 1.89
TRAV19A0A0A6YYK7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TRAV19A0A0A6YYK7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TRAV19A0A0A6YYK7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TRAV19A0A0A6YYK7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TRAV19A0A0A6YYK7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TRAV19A0A0A6YYK7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TRAV19A0A0A6YYK7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
TRAV19A0A0A6YYK7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
TRAV19A0A0A6YYK7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
TRAV19A0A0A6YYK7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.85■■□□□ 1.89
TRAV19A0A0A6YYK7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.85■■□□□ 1.89
TRAV19A0A0A6YYK7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.85■■□□□ 1.89
TRAV19A0A0A6YYK7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TRAV19A0A0A6YYK7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
TRAV19A0A0A6YYK7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TRAV19A0A0A6YYK7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TRAV19A0A0A6YYK7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.84■■□□□ 1.89
TRAV19A0A0A6YYK7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TRAV19A0A0A6YYK7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.83■■□□□ 1.89
TRAV19A0A0A6YYK7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
TRAV19A0A0A6YYK7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TRAV19A0A0A6YYK7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TRAV19A0A0A6YYK7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TRAV19A0A0A6YYK7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TRAV19A0A0A6YYK7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
TRAV19A0A0A6YYK7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
TRAV19A0A0A6YYK7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
TRAV19A0A0A6YYK7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms