Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
TRAV6A0A075B6T7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRAV6A0A075B6T7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRAV6A0A075B6T7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRAV6A0A075B6T7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRAV6A0A075B6T7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC22.18■■□□□ 1.14
TRAV6A0A075B6T7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRAV6A0A075B6T7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRAV6A0A075B6T7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRAV6A0A075B6T7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
TRAV6A0A075B6T7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRAV6A0A075B6T7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.17■■□□□ 1.14
TRAV6A0A075B6T7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.16■■□□□ 1.14
TRAV6A0A075B6T7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC22.15■■□□□ 1.14
TRAV6A0A075B6T7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRAV6A0A075B6T7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TRAV6A0A075B6T7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.14■■□□□ 1.13
TRAV6A0A075B6T7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
TRAV6A0A075B6T7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRAV6A0A075B6T7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TRAV6A0A075B6T7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TRAV6A0A075B6T7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRAV6A0A075B6T7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.12■■□□□ 1.13
TRAV6A0A075B6T7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRAV6A0A075B6T7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TRAV6A0A075B6T7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRAV6A0A075B6T7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV6A0A075B6T7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV6A0A075B6T7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV6A0A075B6T7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV6A0A075B6T7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRAV6A0A075B6T7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
TRAV6A0A075B6T7 BX255925.1-201ENST00000566954 1854 ntBASIC22.09■■□□□ 1.13
TRAV6A0A075B6T7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRAV6A0A075B6T7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TRAV6A0A075B6T7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRAV6A0A075B6T7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
TRAV6A0A075B6T7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
TRAV6A0A075B6T7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC22.08■■□□□ 1.13
TRAV6A0A075B6T7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.13
TRAV6A0A075B6T7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
TRAV6A0A075B6T7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRAV6A0A075B6T7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRAV6A0A075B6T7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.07■■□□□ 1.12
TRAV6A0A075B6T7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRAV6A0A075B6T7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRAV6A0A075B6T7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRAV6A0A075B6T7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRAV6A0A075B6T7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.06■■□□□ 1.12
TRAV6A0A075B6T7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRAV6A0A075B6T7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRAV6A0A075B6T7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.06■■□□□ 1.12
TRAV6A0A075B6T7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRAV6A0A075B6T7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.06■■□□□ 1.12
TRAV6A0A075B6T7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.06■■□□□ 1.12
TRAV6A0A075B6T7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRAV6A0A075B6T7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
TRAV6A0A075B6T7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TRAV6A0A075B6T7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.04■■□□□ 1.12
TRAV6A0A075B6T7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRAV6A0A075B6T7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRAV6A0A075B6T7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.04■■□□□ 1.12
TRAV6A0A075B6T7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
TRAV6A0A075B6T7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.04■■□□□ 1.12
TRAV6A0A075B6T7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRAV6A0A075B6T7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRAV6A0A075B6T7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRAV6A0A075B6T7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRAV6A0A075B6T7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRAV6A0A075B6T7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRAV6A0A075B6T7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRAV6A0A075B6T7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRAV6A0A075B6T7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
TRAV6A0A075B6T7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.01■■□□□ 1.11
TRAV6A0A075B6T7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRAV6A0A075B6T7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
TRAV6A0A075B6T7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.01■■□□□ 1.11
TRAV6A0A075B6T7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRAV6A0A075B6T7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC22■■□□□ 1.11
TRAV6A0A075B6T7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRAV6A0A075B6T7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRAV6A0A075B6T7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRAV6A0A075B6T7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
TRAV6A0A075B6T7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRAV6A0A075B6T7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRAV6A0A075B6T7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TRAV6A0A075B6T7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.98■■□□□ 1.11
TRAV6A0A075B6T7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRAV6A0A075B6T7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
TRAV6A0A075B6T7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.97■■□□□ 1.11
TRAV6A0A075B6T7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRAV6A0A075B6T7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
TRAV6A0A075B6T7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
TRAV6A0A075B6T7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.96■■□□□ 1.11
TRAV6A0A075B6T7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRAV6A0A075B6T7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
TRAV6A0A075B6T7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRAV6A0A075B6T7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
TRAV6A0A075B6T7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRAV6A0A075B6T7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms