Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 TPRX1P1-201ENST00000557620 319 ntBASIC6.94□□□□□ -1.3
CHD7Q9P2D1 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 AP003486.1-201ENST00000525716 3994 ntBASIC6.94□□□□□ -1.3
CHD7Q9P2D1 ADAMTS12-203ENST00000504830 8774 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 DOK6-201ENST00000382713 8890 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 TRIM60-204ENST00000512596 1888 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 COL5A2-201ENST00000374866 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 HCG18-244ENST00000602516 2890 ntBASIC6.94□□□□□ -1.3
CHD7Q9P2D1 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 RNFT1P3-201ENST00000340898 1052 ntBASIC6.94□□□□□ -1.3
CHD7Q9P2D1 DEFA9P-201ENST00000433042 285 ntBASIC6.94□□□□□ -1.3
CHD7Q9P2D1 EMC3-AS1-205ENST00000438698 534 ntBASIC6.94□□□□□ -1.3
CHD7Q9P2D1 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.94□□□□□ -1.3
CHD7Q9P2D1 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 FXNP1-201ENST00000555153 337 ntBASIC6.94□□□□□ -1.3
CHD7Q9P2D1 AC073333.2-201ENST00000603589 769 ntBASIC6.94□□□□□ -1.3
CHD7Q9P2D1 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 PDCD11-201ENST00000369797 6453 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 ZNF587-201ENST00000339656 6882 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 MLYCD-201ENST00000262430 13038 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 AC016908.1-201ENST00000442571 1219 ntBASIC6.93□□□□□ -1.3
CHD7Q9P2D1 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 RNA5SP418-201ENST00000515951 117 ntBASIC6.93□□□□□ -1.3
CHD7Q9P2D1 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 AC127024.6-201ENST00000621598 424 ntBASIC6.93□□□□□ -1.3
CHD7Q9P2D1 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 ACSBG1-201ENST00000258873 6357 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 RN7SKP162-201ENST00000363605 345 ntBASIC6.93□□□□□ -1.3
CHD7Q9P2D1 RPL24P7-201ENST00000399435 453 ntBASIC6.93□□□□□ -1.3
CHD7Q9P2D1 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 RPL5P6-201ENST00000425640 886 ntBASIC6.93□□□□□ -1.3
CHD7Q9P2D1 HMGN1P6-201ENST00000438508 291 ntBASIC6.93□□□□□ -1.3
CHD7Q9P2D1 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 AL133351.3-201ENST00000454998 193 ntBASIC6.93□□□□□ -1.3
CHD7Q9P2D1 CST12P-201ENST00000457644 362 ntBASIC6.93□□□□□ -1.3
CHD7Q9P2D1 AC011352.2-201ENST00000514574 1016 ntBASIC6.93□□□□□ -1.3
CHD7Q9P2D1 AP005597.2-201ENST00000526238 341 ntBASIC6.93□□□□□ -1.3
CHD7Q9P2D1 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 AP000577.1-201ENST00000624366 878 ntBASIC6.93□□□□□ -1.3
CHD7Q9P2D1 AL049541.2-201ENST00000626377 555 ntBASIC6.93□□□□□ -1.3
CHD7Q9P2D1 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 URB2-201ENST00000258243 5613 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 ATP5A1-202ENST00000398752 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 MAGEB16-202ENST00000399987 1736 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 RN7SKP296-201ENST00000411185 341 ntBASIC6.93□□□□□ -1.3
CHD7Q9P2D1 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 OR4A21P-201ENST00000532759 944 ntBASIC6.93□□□□□ -1.3
CHD7Q9P2D1 AC090651.1-201ENST00000567865 634 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms