RNA–Protein interactions for RNA: ENST00000177648.13

ALPK1-201, Transcript of alpha kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ALPK1, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK1-201ENST00000177648 NISCHQ9Y2I1 1504 aa15.1■□□□□ 0.01
ALPK1-201ENST00000177648 DCAF8L2P0C7V8 631 aa13.36□□□□□ -0.27
ALPK1-201ENST00000177648 SHROOM4Q9ULL8 1493 aa13.29□□□□□ -0.28
ALPK1-201ENST00000177648 SUPT5HO00267 1087 aaKnown RBP13.12□□□□□ -0.31
ALPK1-201ENST00000177648 CCDC180Q9P1Z9 1646 aa12.94□□□□□ -0.34
ALPK1-201ENST00000177648 ZCCHC6Q5VYS8 1495 aaKnown RBP12.72□□□□□ -0.37
ALPK1-201ENST00000177648 DCAF1Q9Y4B6 1507 aa12.52□□□□□ -0.4
ALPK1-201ENST00000177648 ABCC9O60706 1549 aa12.46□□□□□ -0.41
ALPK1-201ENST00000177648 ZEB1P37275 1124 aaPredicted RBP12.39□□□□□ -0.43
ALPK1-201ENST00000177648 CHIC1Q5VXU3 224 aa12.37□□□□□ -0.43
ALPK1-201ENST00000177648 EHMT2Q96KQ7 1210 aa12.28□□□□□ -0.44
ALPK1-201ENST00000177648 TRIM41Q8WV44 630 aa12.27□□□□□ -0.45
ALPK1-201ENST00000177648 MYO15BQ96JP2 1530 aa12.23□□□□□ -0.45
ALPK1-201ENST00000177648 FAM9AQ8IZU1 332 aaPredicted RBP12.22□□□□□ -0.45
ALPK1-201ENST00000177648 PCGF6Q9BYE7 350 aa12.21□□□□□ -0.45
ALPK1-201ENST00000177648 TRIM26Q12899 539 aaPredicted RBP12.16□□□□□ -0.46
ALPK1-201ENST00000177648 HRCP23327 699 aa12.15□□□□□ -0.46
ALPK1-201ENST00000177648 LOC105371045A0A1W2PR82 267 aa12.15□□□□□ -0.46
ALPK1-201ENST00000177648 NACADO15069 1562 aa12.13□□□□□ -0.47
ALPK1-201ENST00000177648 SCRIBQ14160 1630 aa12.09□□□□□ -0.47
ALPK1-201ENST00000177648 APLP2Q06481 763 aa12.03□□□□□ -0.48
ALPK1-201ENST00000177648 RB1CC1Q8TDY2 1594 aa11.98□□□□□ -0.49
ALPK1-201ENST00000177648 RSF1Q96T23 1441 aaPredicted RBP11.89□□□□□ -0.51
ALPK1-201ENST00000177648 PABPN1Q86U42 306 aaKnown RBP eCLIP11.87□□□□□ -0.51
ALPK1-201ENST00000177648 PELP1Q8IZL8 1130 aaKnown RBP11.86□□□□□ -0.51
ALPK1-201ENST00000177648 TTBK1Q5TCY1 1321 aaPredicted RBP11.85□□□□□ -0.51
ALPK1-201ENST00000177648 PPARGC1BQ86YN6 1023 aaKnown RBP11.84□□□□□ -0.51
ALPK1-201ENST00000177648 CENPBP07199 599 aaPredicted RBP11.81□□□□□ -0.52
ALPK1-201ENST00000177648 BAZ1AQ9NRL2 1556 aaPredicted RBP11.81□□□□□ -0.52
ALPK1-201ENST00000177648 EEA1Q15075 1411 aa11.81□□□□□ -0.52
ALPK1-201ENST00000177648 CCER1Q8TC90 406 aaPredicted RBP11.8□□□□□ -0.52
ALPK1-201ENST00000177648 UBTFP17480 764 aaKnown RBP11.8□□□□□ -0.52
ALPK1-201ENST00000177648 CECR2Q9BXF3 1484 aa11.76□□□□□ -0.53
ALPK1-201ENST00000177648 RANGAP1P46060 587 aaPredicted RBP11.69□□□□□ -0.54
ALPK1-201ENST00000177648 MROH2BQ7Z745 1585 aa11.66□□□□□ -0.54
ALPK1-201ENST00000177648 CSRNP3Q8WYN3 585 aa11.62□□□□□ -0.55
ALPK1-201ENST00000177648 MYT1Q01538 1121 aa11.59□□□□□ -0.55
ALPK1-201ENST00000177648 TOP2AP11388 1531 aaKnown RBP11.58□□□□□ -0.56
ALPK1-201ENST00000177648 WIZO95785 1651 aa11.55□□□□□ -0.56
ALPK1-201ENST00000177648 TNIKQ9UKE5 1360 aa11.53□□□□□ -0.56
ALPK1-201ENST00000177648 GOLGA3Q08378 1498 aa11.53□□□□□ -0.56
ALPK1-201ENST00000177648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.51□□□□□ -0.57
ALPK1-201ENST00000177648 SMARCA2P51531 1590 aa11.48□□□□□ -0.57
ALPK1-201ENST00000177648 CEP164Q9UPV0 1460 aa11.48□□□□□ -0.57
ALPK1-201ENST00000177648 WRNQ14191 1432 aaPredicted RBP eCLIP11.46□□□□□ -0.57
ALPK1-201ENST00000177648 SMARCA4P51532 1647 aa11.46□□□□□ -0.57
ALPK1-201ENST00000177648 BAZ1BQ9UIG0 1483 aaKnown RBP11.45□□□□□ -0.58
ALPK1-201ENST00000177648 CCDC88BA6NC98 1476 aa11.42□□□□□ -0.58
ALPK1-201ENST00000177648 CEP162Q5TB80 1403 aa11.42□□□□□ -0.58
ALPK1-201ENST00000177648 UNC13AQ9UPW8 1703 aa11.42□□□□□ -0.58
ALPK1-201ENST00000177648 ABCC8Q09428 1581 aa11.4□□□□□ -0.58
ALPK1-201ENST00000177648 DIEXFQ68CQ4 756 aaKnown RBP11.4□□□□□ -0.58
ALPK1-201ENST00000177648 CLSPNQ9HAW4 1339 aa11.4□□□□□ -0.58
ALPK1-201ENST00000177648 BICRAQ9NZM4 1560 aa11.4□□□□□ -0.58
ALPK1-201ENST00000177648 HNRNPUL2Q1KMD3 747 aaKnown RBP11.39□□□□□ -0.59
ALPK1-201ENST00000177648 CLIP1P30622 1438 aa11.36□□□□□ -0.59
ALPK1-201ENST00000177648 ZNF316A6NFI3 1004 aaPredicted RBP11.36□□□□□ -0.59
ALPK1-201ENST00000177648 SOGA1O94964 1423 aa11.35□□□□□ -0.59
ALPK1-201ENST00000177648 ACIN1Q9UKV3 1341 aaKnown RBP11.33□□□□□ -0.6
ALPK1-201ENST00000177648 ATP1B4Q9UN42 357 aaPredicted RBP11.32□□□□□ -0.6
ALPK1-201ENST00000177648 KIF27Q86VH2 1401 aa11.3□□□□□ -0.6
ALPK1-201ENST00000177648 DNAJC5BQ9UF47 199 aa11.29□□□□□ -0.6
ALPK1-201ENST00000177648 NEFLP07196 543 aa11.26□□□□□ -0.61
ALPK1-201ENST00000177648 ITGAEP38570 1179 aa11.25□□□□□ -0.61
ALPK1-201ENST00000177648 VPS8Q8N3P4 1428 aa11.24□□□□□ -0.61
ALPK1-201ENST00000177648 ATAD2BQ9ULI0 1458 aa11.24□□□□□ -0.61
ALPK1-201ENST00000177648 RUSC2Q8N2Y8 1516 aa11.22□□□□□ -0.61
ALPK1-201ENST00000177648 PEG3Q9GZU2 1588 aa11.2□□□□□ -0.62
ALPK1-201ENST00000177648 KIF21BO75037 1637 aa11.19□□□□□ -0.62
ALPK1-201ENST00000177648 YTHDC1Q96MU7 727 aaKnown RBP11.18□□□□□ -0.62
ALPK1-201ENST00000177648 FHAD1B1AJZ9 1412 aa11.16□□□□□ -0.62
ALPK1-201ENST00000177648 EIF4G1Q04637 1599 aaKnown RBP11.14□□□□□ -0.63
ALPK1-201ENST00000177648 ERICH3Q5RHP9 1530 aa11.12□□□□□ -0.63
ALPK1-201ENST00000177648 TIMELESSQ9UNS1 1208 aa11.12□□□□□ -0.63
ALPK1-201ENST00000177648 HMGXB3Q12766 1538 aa11.11□□□□□ -0.63
ALPK1-201ENST00000177648 NCAPD3P42695 1498 aa11.11□□□□□ -0.63
ALPK1-201ENST00000177648 P3H3Q8IVL6 736 aa11.11□□□□□ -0.63
ALPK1-201ENST00000177648 FAM50AQ14320 339 aaKnown RBP11.09□□□□□ -0.63
ALPK1-201ENST00000177648 CC2D2AQ9P2K1 1620 aa11.06□□□□□ -0.64
ALPK1-201ENST00000177648 RAPGEF2Q9Y4G8 1499 aa11.05□□□□□ -0.64
ALPK1-201ENST00000177648 CDK11AQ9UQ88 783 aaPredicted RBP11.05□□□□□ -0.64
ALPK1-201ENST00000177648 GTF3C3Q9Y5Q9 886 aa11.04□□□□□ -0.64
ALPK1-201ENST00000177648 TOP2BQ02880 1626 aa11.03□□□□□ -0.64
ALPK1-201ENST00000177648 SYNJ1O43426 1573 aa11.03□□□□□ -0.64
ALPK1-201ENST00000177648 CCNB3Q8WWL7 1395 aa11.03□□□□□ -0.64
ALPK1-201ENST00000177648 ANP32CO43423 234 aa11.03□□□□□ -0.64
ALPK1-201ENST00000177648 CARMIL1Q5VZK9 1371 aa11.02□□□□□ -0.65
ALPK1-201ENST00000177648 CADPSQ9ULU8 1353 aa11.01□□□□□ -0.65
ALPK1-201ENST00000177648 CUX2O14529 1486 aa11□□□□□ -0.65
ALPK1-201ENST00000177648 MTUS2Q5JR59 1369 aa10.98□□□□□ -0.65
ALPK1-201ENST00000177648 TONSLQ96HA7 1378 aa10.98□□□□□ -0.65
ALPK1-201ENST00000177648 ERICH6Q7L0X2 663 aa10.97□□□□□ -0.65
ALPK1-201ENST00000177648 FMN1Q68DA7 1419 aa10.97□□□□□ -0.65
ALPK1-201ENST00000177648 CFTRP13569 1480 aa10.96□□□□□ -0.66
ALPK1-201ENST00000177648 KANK4Q5T7N3 995 aaPredicted RBP10.96□□□□□ -0.66
ALPK1-201ENST00000177648 NEUROD1Q13562 356 aa10.94□□□□□ -0.66
ALPK1-201ENST00000177648 PDS5BQ9NTI5 1447 aa10.93□□□□□ -0.66
ALPK1-201ENST00000177648 PRXQ9BXM0 1461 aa10.93□□□□□ -0.66
ALPK1-201ENST00000177648 BIVM-ERCC5R4GMW8 1640 aa10.92□□□□□ -0.66
ALPK1-201ENST00000177648 SETD5Q9C0A6 1442 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms