RNA–Protein interactions for RNA: ENST00000438508.1

HMGN1P6-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 6, humanhuman

BASIC

Gene HMGN1P6, Length 291 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P6-201ENST00000438508 AEBP2Q6ZN18 517 aaPredicted RBP31.88■■■□□ 2.69
HMGN1P6-201ENST00000438508 CHIC1Q5VXU3 224 aa29.82■■■□□ 2.36
HMGN1P6-201ENST00000438508 SENP3Q9H4L4 574 aaPredicted RBP27.4■■□□□ 1.98
HMGN1P6-201ENST00000438508 PHF23Q9BUL5 403 aaPredicted RBP26.87■■□□□ 1.89
HMGN1P6-201ENST00000438508 FOXD1Q16676 465 aa25.58■■□□□ 1.69
HMGN1P6-201ENST00000438508 POTEDQ86YR6 584 aa25.1■■□□□ 1.61
HMGN1P6-201ENST00000438508 MSH5O43196 834 aa24.32■■□□□ 1.48
HMGN1P6-201ENST00000438508 PIAS4Q8N2W9 510 aaPredicted RBP23.65■■□□□ 1.38
HMGN1P6-201ENST00000438508 PPP6R1Q9UPN7 881 aa23.25■■□□□ 1.31
HMGN1P6-201ENST00000438508 PLPPR3Q6T4P5 718 aa23.21■■□□□ 1.31
HMGN1P6-201ENST00000438508 ADRA2BP18089 450 aa23.08■■□□□ 1.29
HMGN1P6-201ENST00000438508 DMRT2Q9Y5R5 561 aa21.6■■□□□ 1.05
HMGN1P6-201ENST00000438508 MAPK8IP2Q13387 824 aaPredicted RBP21.45■■□□□ 1.02
HMGN1P6-201ENST00000438508 CACNB1Q02641 598 aaPredicted RBP21.28■■□□□ 1
HMGN1P6-201ENST00000438508 SCAF1Q9H7N4 1312 aaKnown RBP21.25■□□□□ 0.99
HMGN1P6-201ENST00000438508 RNF39Q9H2S5 420 aa20.68■□□□□ 0.9
HMGN1P6-201ENST00000438508 DCAF8L1A6NGE4 600 aa20.54■□□□□ 0.88
HMGN1P6-201ENST00000438508 HOXD11P31277 338 aaPredicted RBP20.51■□□□□ 0.87
HMGN1P6-201ENST00000438508 C1QBPQ07021 282 aaKnown RBP20.36■□□□□ 0.85
HMGN1P6-201ENST00000438508 PPP4R3CPQ6ZMV5 832 aa20.19■□□□□ 0.82
HMGN1P6-201ENST00000438508 DNAJC5BQ9UF47 199 aa20.12■□□□□ 0.81
HMGN1P6-201ENST00000438508 RNF216Q9NWF9 866 aaPredicted RBP20.11■□□□□ 0.81
HMGN1P6-201ENST00000438508 CNKSR2Q8WXI2 1034 aa20.05■□□□□ 0.8
HMGN1P6-201ENST00000438508 POTEHQ6S545 545 aa19.5■□□□□ 0.71
HMGN1P6-201ENST00000438508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.4■□□□□ 0.7
HMGN1P6-201ENST00000438508 NCBP3Q53F19 620 aaKnown RBP19.19■□□□□ 0.66
HMGN1P6-201ENST00000438508 DSG3P32926 999 aa19.05■□□□□ 0.64
HMGN1P6-201ENST00000438508 U3KPZ7 1027 aaPredicted RBP18.95■□□□□ 0.62
HMGN1P6-201ENST00000438508 NPM3O75607 178 aaKnown RBP18.88■□□□□ 0.61
HMGN1P6-201ENST00000438508 SPINK5Q9NQ38 1064 aaPredicted RBP18.87■□□□□ 0.61
HMGN1P6-201ENST00000438508 CAPN15O75808 1086 aa18.85■□□□□ 0.61
HMGN1P6-201ENST00000438508 APLP2Q06481 763 aa18.4■□□□□ 0.54
HMGN1P6-201ENST00000438508 ZNF219Q9P2Y4 722 aaPredicted RBP18.39■□□□□ 0.53
HMGN1P6-201ENST00000438508 TRHP20396 242 aaPredicted RBP18.33■□□□□ 0.52
HMGN1P6-201ENST00000438508 ABCB7O75027 752 aa18.3■□□□□ 0.52
HMGN1P6-201ENST00000438508 SLC4A2P04920 1241 aa18.26■□□□□ 0.51
HMGN1P6-201ENST00000438508 RBM42Q9BTD8 480 aaKnown RBP18.23■□□□□ 0.51
HMGN1P6-201ENST00000438508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.19■□□□□ 0.5
HMGN1P6-201ENST00000438508 HNRNPUL2Q1KMD3 747 aaKnown RBP18.19■□□□□ 0.5
HMGN1P6-201ENST00000438508 CHRDL2Q6WN34 429 aa18.11■□□□□ 0.49
HMGN1P6-201ENST00000438508 SAMD1Q6SPF0 538 aaPredicted RBP18.02■□□□□ 0.48
HMGN1P6-201ENST00000438508 SP7Q8TDD2 431 aaPredicted RBP17.9■□□□□ 0.46
HMGN1P6-201ENST00000438508 KCNA4P22459 653 aa17.72■□□□□ 0.43
HMGN1P6-201ENST00000438508 POLA2Q14181 598 aa17.72■□□□□ 0.43
HMGN1P6-201ENST00000438508 AKT1S1Q96B36 256 aa17.63■□□□□ 0.41
HMGN1P6-201ENST00000438508 MYCNP04198 464 aaPredicted RBP17.51■□□□□ 0.39
HMGN1P6-201ENST00000438508 PIP4P2Q8N4L2 257 aa17.49■□□□□ 0.39
HMGN1P6-201ENST00000438508 REM2Q8IYK8 340 aaPredicted RBP17.43■□□□□ 0.38
HMGN1P6-201ENST00000438508 ZBTB12Q9Y330 459 aaPredicted RBP17.38■□□□□ 0.37
HMGN1P6-201ENST00000438508 HAX1O00165 279 aa17.36■□□□□ 0.37
HMGN1P6-201ENST00000438508 FXR2P51116 673 aaKnown RBP eCLIP17.32■□□□□ 0.36
HMGN1P6-201ENST00000438508 PITPNM1O00562 1244 aa17.22■□□□□ 0.35
HMGN1P6-201ENST00000438508 OSCARQ8IYS5 282 aa17.14■□□□□ 0.33
HMGN1P6-201ENST00000438508 ATF5Q9Y2D1 282 aaPredicted RBP17.1■□□□□ 0.33
HMGN1P6-201ENST00000438508 EVX2Q03828 476 aa17.09■□□□□ 0.33
HMGN1P6-201ENST00000438508 FOXD4L1Q9NU39 408 aa16.85■□□□□ 0.29
HMGN1P6-201ENST00000438508 C19orf67A6NJJ6 358 aa16.79■□□□□ 0.28
HMGN1P6-201ENST00000438508 SPDYE2BA6NHP3 402 aa16.77■□□□□ 0.28
HMGN1P6-201ENST00000438508 SPDYE6P0CI01 402 aa16.77■□□□□ 0.28
HMGN1P6-201ENST00000438508 SPDYE2Q495Y8 402 aa16.77■□□□□ 0.28
HMGN1P6-201ENST00000438508 LHX8Q68G74 356 aa16.76■□□□□ 0.27
HMGN1P6-201ENST00000438508 PRKAR2AP13861 404 aaKnown RBP16.75■□□□□ 0.27
HMGN1P6-201ENST00000438508 GABBR2O75899 941 aa16.7■□□□□ 0.26
HMGN1P6-201ENST00000438508 SPDYE1Q8NFV5 336 aaPredicted RBP16.65■□□□□ 0.26
HMGN1P6-201ENST00000438508 SLC4A1APQ9BWU0 796 aaKnown RBP16.56■□□□□ 0.24
HMGN1P6-201ENST00000438508 ATXN8OSP0DMR3 200 aa16.53■□□□□ 0.24
HMGN1P6-201ENST00000438508 FBLN2P98095 1184 aa16.53■□□□□ 0.24
HMGN1P6-201ENST00000438508 CLEC11AQ9Y240 323 aa16.53■□□□□ 0.24
HMGN1P6-201ENST00000438508 SSUH2Q9Y2M2 353 aa16.46■□□□□ 0.23
HMGN1P6-201ENST00000438508 POTEIP0CG38 1075 aa16.34■□□□□ 0.21
HMGN1P6-201ENST00000438508 ZNF692Q9BU19 519 aaPredicted RBP16.34■□□□□ 0.21
HMGN1P6-201ENST00000438508 CLCN6P51797 869 aa16.33■□□□□ 0.2
HMGN1P6-201ENST00000438508 MKRN4PQ13434 485 aaPredicted RBP16.31■□□□□ 0.2
HMGN1P6-201ENST00000438508 CHADLQ6NUI6 762 aa16.31■□□□□ 0.2
HMGN1P6-201ENST00000438508 ZBTB22O15209 634 aa16.29■□□□□ 0.2
HMGN1P6-201ENST00000438508 PLSCR2Q9NRY7 297 aa16.25■□□□□ 0.19
HMGN1P6-201ENST00000438508 PRR29P0C7W0 189 aa16.22■□□□□ 0.19
HMGN1P6-201ENST00000438508 CD44P16070 742 aaKnown RBP16.16■□□□□ 0.18
HMGN1P6-201ENST00000438508 FARP1Q9Y4F1 1045 aaPredicted RBP16.09■□□□□ 0.17
HMGN1P6-201ENST00000438508 PABPN1Q86U42 306 aaKnown RBP eCLIP16.07■□□□□ 0.16
HMGN1P6-201ENST00000438508 DCBLD2Q96PD2 775 aa16.03■□□□□ 0.16
HMGN1P6-201ENST00000438508 ZNF579Q8NAF0 562 aaKnown RBP15.96■□□□□ 0.15
HMGN1P6-201ENST00000438508 OTUD5Q96G74 571 aa15.9■□□□□ 0.14
HMGN1P6-201ENST00000438508 NISCHQ9Y2I1 1504 aa15.86■□□□□ 0.13
HMGN1P6-201ENST00000438508 POTEMA6NI47 508 aa15.8■□□□□ 0.12
HMGN1P6-201ENST00000438508 ZRANB1Q9UGI0 708 aa15.78■□□□□ 0.12
HMGN1P6-201ENST00000438508 POTEB2H3BUK9 544 aa15.77■□□□□ 0.12
HMGN1P6-201ENST00000438508 PCDH10Q9P2E7 1040 aa15.75■□□□□ 0.11
HMGN1P6-201ENST00000438508 GALR2O43603 387 aaPredicted RBP15.73■□□□□ 0.11
HMGN1P6-201ENST00000438508 POTEGQ6S5H5 508 aa15.72■□□□□ 0.11
HMGN1P6-201ENST00000438508 CREBZFQ9NS37 354 aa15.65■□□□□ 0.1
HMGN1P6-201ENST00000438508 STAG3Q9UJ98 1225 aa15.55■□□□□ 0.08
HMGN1P6-201ENST00000438508 PELP1Q8IZL8 1130 aaKnown RBP15.53■□□□□ 0.08
HMGN1P6-201ENST00000438508 PAK3O75914 559 aaPredicted RBP15.51■□□□□ 0.07
HMGN1P6-201ENST00000438508 PHF12Q96QT6 1004 aa15.48■□□□□ 0.07
HMGN1P6-201ENST00000438508 ASTLQ6HA08 431 aaPredicted RBP15.45■□□□□ 0.06
HMGN1P6-201ENST00000438508 MAMSTRQ6ZN01 415 aa15.44■□□□□ 0.06
HMGN1P6-201ENST00000438508 POTEJP0CG39 1038 aa15.42■□□□□ 0.06
HMGN1P6-201ENST00000438508 C7P10643 843 aa15.42■□□□□ 0.06
HMGN1P6-201ENST00000438508 SLC39A7Q92504 469 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms