RNA–Protein interactions for RNA: ENST00000363605.1

RN7SKP162-201, Transcript of RNA, 7SK small nuclear pseudogene 162, humanhuman

BASIC

Gene RN7SKP162, Length 345 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP162-201ENST00000363605 AEBP2Q6ZN18 517 aaPredicted RBP17.95■□□□□ 0.46
RN7SKP162-201ENST00000363605 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
RN7SKP162-201ENST00000363605 SENP3Q9H4L4 574 aaPredicted RBP15.27■□□□□ 0.04
RN7SKP162-201ENST00000363605 PHF23Q9BUL5 403 aaPredicted RBP15.07■□□□□ 0
RN7SKP162-201ENST00000363605 FOXD1Q16676 465 aa14.26□□□□□ -0.13
RN7SKP162-201ENST00000363605 NISCHQ9Y2I1 1504 aa14.22□□□□□ -0.13
RN7SKP162-201ENST00000363605 PLPPR3Q6T4P5 718 aa13.53□□□□□ -0.24
RN7SKP162-201ENST00000363605 ABCC9O60706 1549 aa13.44□□□□□ -0.26
RN7SKP162-201ENST00000363605 DNAJC5BQ9UF47 199 aa13.36□□□□□ -0.27
RN7SKP162-201ENST00000363605 MSH5O43196 834 aa13.33□□□□□ -0.28
RN7SKP162-201ENST00000363605 PIAS4Q8N2W9 510 aaPredicted RBP13.31□□□□□ -0.28
RN7SKP162-201ENST00000363605 PPP6R1Q9UPN7 881 aa13.31□□□□□ -0.28
RN7SKP162-201ENST00000363605 ADRA2BP18089 450 aa13.26□□□□□ -0.29
RN7SKP162-201ENST00000363605 POTEDQ86YR6 584 aa13.11□□□□□ -0.31
RN7SKP162-201ENST00000363605 DNAJC5Q9H3Z4 198 aa12.9□□□□□ -0.34
RN7SKP162-201ENST00000363605 CCDC180Q9P1Z9 1646 aa12.84□□□□□ -0.35
RN7SKP162-201ENST00000363605 RB1CC1Q8TDY2 1594 aa12.44□□□□□ -0.42
RN7SKP162-201ENST00000363605 PABPN1Q86U42 306 aaKnown RBP eCLIP12.34□□□□□ -0.43
RN7SKP162-201ENST00000363605 CECR2Q9BXF3 1484 aa12.21□□□□□ -0.45
RN7SKP162-201ENST00000363605 NACADO15069 1562 aa12.19□□□□□ -0.46
RN7SKP162-201ENST00000363605 MAPK8IP2Q13387 824 aaPredicted RBP12.19□□□□□ -0.46
RN7SKP162-201ENST00000363605 UNC13AQ9UPW8 1703 aa12.17□□□□□ -0.46
RN7SKP162-201ENST00000363605 BICRAQ9NZM4 1560 aa12.13□□□□□ -0.47
RN7SKP162-201ENST00000363605 CC2D2AQ9P2K1 1620 aa12.12□□□□□ -0.47
RN7SKP162-201ENST00000363605 DMRT2Q9Y5R5 561 aa12.12□□□□□ -0.47
RN7SKP162-201ENST00000363605 SCAF1Q9H7N4 1312 aaKnown RBP12.09□□□□□ -0.47
RN7SKP162-201ENST00000363605 DCAF8L2P0C7V8 631 aa12.08□□□□□ -0.48
RN7SKP162-201ENST00000363605 CUX2O14529 1486 aa11.97□□□□□ -0.49
RN7SKP162-201ENST00000363605 MYO15BQ96JP2 1530 aa11.96□□□□□ -0.49
RN7SKP162-201ENST00000363605 TRIM41Q8WV44 630 aa11.93□□□□□ -0.5
RN7SKP162-201ENST00000363605 SHROOM4Q9ULL8 1493 aa11.91□□□□□ -0.5
RN7SKP162-201ENST00000363605 EIF4G1Q04637 1599 aaKnown RBP11.89□□□□□ -0.51
RN7SKP162-201ENST00000363605 PPP4R3CPQ6ZMV5 832 aa11.86□□□□□ -0.51
RN7SKP162-201ENST00000363605 DCAF1Q9Y4B6 1507 aa11.73□□□□□ -0.53
RN7SKP162-201ENST00000363605 ZCCHC6Q5VYS8 1495 aaKnown RBP11.72□□□□□ -0.53
RN7SKP162-201ENST00000363605 SCRIBQ14160 1630 aa11.68□□□□□ -0.54
RN7SKP162-201ENST00000363605 ERCC6Q03468 1493 aa11.66□□□□□ -0.54
RN7SKP162-201ENST00000363605 HOXD11P31277 338 aaPredicted RBP11.66□□□□□ -0.54
RN7SKP162-201ENST00000363605 CNKSR2Q8WXI2 1034 aa11.64□□□□□ -0.55
RN7SKP162-201ENST00000363605 DCAF8L1A6NGE4 600 aa11.59□□□□□ -0.55
RN7SKP162-201ENST00000363605 RNF216Q9NWF9 866 aaPredicted RBP11.56□□□□□ -0.56
RN7SKP162-201ENST00000363605 CACNB1Q02641 598 aaPredicted RBP11.46□□□□□ -0.57
RN7SKP162-201ENST00000363605 THOC2Q8NI27 1593 aaKnown RBP11.41□□□□□ -0.58
RN7SKP162-201ENST00000363605 RNF39Q9H2S5 420 aa11.4□□□□□ -0.58
RN7SKP162-201ENST00000363605 NCBP3Q53F19 620 aaKnown RBP11.37□□□□□ -0.59
RN7SKP162-201ENST00000363605 NESP48681 1621 aa11.31□□□□□ -0.6
RN7SKP162-201ENST00000363605 NCAPD3P42695 1498 aa11.28□□□□□ -0.6
RN7SKP162-201ENST00000363605 BAZ1AQ9NRL2 1556 aaPredicted RBP11.26□□□□□ -0.61
RN7SKP162-201ENST00000363605 NPM3O75607 178 aaKnown RBP11.25□□□□□ -0.61
RN7SKP162-201ENST00000363605 OSCARQ8IYS5 282 aa11.23□□□□□ -0.61
RN7SKP162-201ENST00000363605 RIMBP3CA6NJZ7 1639 aa11.21□□□□□ -0.61
RN7SKP162-201ENST00000363605 RIMBP3BA6NNM3 1639 aa11.21□□□□□ -0.61
RN7SKP162-201ENST00000363605 RIMBP3Q9UFD9 1639 aa11.21□□□□□ -0.61
RN7SKP162-201ENST00000363605 SMARCA2P51531 1590 aa11.21□□□□□ -0.61
RN7SKP162-201ENST00000363605 ATAD2BQ9ULI0 1458 aa11.2□□□□□ -0.62
RN7SKP162-201ENST00000363605 C1QBPQ07021 282 aaKnown RBP11.2□□□□□ -0.62
RN7SKP162-201ENST00000363605 ILDR1Q86SU0 546 aaPredicted RBP11.17□□□□□ -0.62
RN7SKP162-201ENST00000363605 KIF21AQ7Z4S6 1674 aa11.15□□□□□ -0.62
RN7SKP162-201ENST00000363605 HMGXB3Q12766 1538 aa11.14□□□□□ -0.63
RN7SKP162-201ENST00000363605 TRHP20396 242 aaPredicted RBP11.14□□□□□ -0.63
RN7SKP162-201ENST00000363605 SMARCA4P51532 1647 aa11.13□□□□□ -0.63
RN7SKP162-201ENST00000363605 LAMC3Q9Y6N6 1575 aa11.11□□□□□ -0.63
RN7SKP162-201ENST00000363605 ARHGEF11O15085 1522 aa11.09□□□□□ -0.63
RN7SKP162-201ENST00000363605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.08□□□□□ -0.64
RN7SKP162-201ENST00000363605 PDS5BQ9NTI5 1447 aa11.07□□□□□ -0.64
RN7SKP162-201ENST00000363605 BAZ1BQ9UIG0 1483 aaKnown RBP11.06□□□□□ -0.64
RN7SKP162-201ENST00000363605 WDR62O43379 1518 aa11.05□□□□□ -0.64
RN7SKP162-201ENST00000363605 PEG3Q9GZU2 1588 aa11.03□□□□□ -0.64
RN7SKP162-201ENST00000363605 MRC2Q9UBG0 1479 aa11.03□□□□□ -0.64
RN7SKP162-201ENST00000363605 KCNA4P22459 653 aa11.01□□□□□ -0.65
RN7SKP162-201ENST00000363605 CYB5RLQ6IPT4 315 aa11.01□□□□□ -0.65
RN7SKP162-201ENST00000363605 MROH2BQ7Z745 1585 aa10.97□□□□□ -0.65
RN7SKP162-201ENST00000363605 ARAP1Q96P48 1450 aa10.93□□□□□ -0.66
RN7SKP162-201ENST00000363605 CADPSQ9ULU8 1353 aa10.91□□□□□ -0.66
RN7SKP162-201ENST00000363605 U3KPZ7 1027 aaPredicted RBP10.89□□□□□ -0.67
RN7SKP162-201ENST00000363605 WIZO95785 1651 aa10.82□□□□□ -0.68
RN7SKP162-201ENST00000363605 CEP164Q9UPV0 1460 aa10.81□□□□□ -0.68
RN7SKP162-201ENST00000363605 FANCD2Q9BXW9 1451 aa10.78□□□□□ -0.68
RN7SKP162-201ENST00000363605 RSF1Q96T23 1441 aaPredicted RBP10.77□□□□□ -0.68
RN7SKP162-201ENST00000363605 SLC4A2P04920 1241 aa10.76□□□□□ -0.69
RN7SKP162-201ENST00000363605 CFTRP13569 1480 aa10.74□□□□□ -0.69
RN7SKP162-201ENST00000363605 SPINK5Q9NQ38 1064 aaPredicted RBP10.74□□□□□ -0.69
RN7SKP162-201ENST00000363605 URB2Q14146 1524 aaKnown RBP10.73□□□□□ -0.69
RN7SKP162-201ENST00000363605 ZNF608Q9ULD9 1512 aaPredicted RBP10.69□□□□□ -0.7
RN7SKP162-201ENST00000363605 CAPN15O75808 1086 aa10.69□□□□□ -0.7
RN7SKP162-201ENST00000363605 CHD1O14646 1710 aa10.68□□□□□ -0.7
RN7SKP162-201ENST00000363605 DSG3P32926 999 aa10.66□□□□□ -0.7
RN7SKP162-201ENST00000363605 TOP2AP11388 1531 aaKnown RBP10.64□□□□□ -0.71
RN7SKP162-201ENST00000363605 KDM4FA0A1W2PPD8 638 aa10.63□□□□□ -0.71
RN7SKP162-201ENST00000363605 IFT140Q96RY7 1462 aa10.62□□□□□ -0.71
RN7SKP162-201ENST00000363605 PRDM2Q13029 1718 aa10.62□□□□□ -0.71
RN7SKP162-201ENST00000363605 EIF4G3O43432 1585 aaKnown RBP10.6□□□□□ -0.71
RN7SKP162-201ENST00000363605 ERCC6L2Q5T890 1561 aa10.6□□□□□ -0.71
RN7SKP162-201ENST00000363605 LMTK3Q96Q04 1460 aa10.57□□□□□ -0.72
RN7SKP162-201ENST00000363605 FBXO41Q8TF61 875 aa10.57□□□□□ -0.72
RN7SKP162-201ENST00000363605 TOPBP1Q92547 1522 aa10.56□□□□□ -0.72
RN7SKP162-201ENST00000363605 CCDC88BA6NC98 1476 aa10.55□□□□□ -0.72
RN7SKP162-201ENST00000363605 CLASP1Q7Z460 1538 aa10.55□□□□□ -0.72
RN7SKP162-201ENST00000363605 FBLN2P98095 1184 aa10.53□□□□□ -0.72
RN7SKP162-201ENST00000363605 SOCS7O14512 581 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms