RNA–Protein interactions for RNA: ENST00000273411.2

RPL39P5-201, Transcript of ribosomal protein L39 pseudogene 5, humanhuman

TSL 1 (best) BASIC

Gene RPL39P5, Length 449 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P5-201ENST00000273411 AEBP2Q6ZN18 517 aaPredicted RBP21.86■■□□□ 1.09
RPL39P5-201ENST00000273411 CHIC1Q5VXU3 224 aa20.68■□□□□ 0.9
RPL39P5-201ENST00000273411 SENP3Q9H4L4 574 aaPredicted RBP18.67■□□□□ 0.58
RPL39P5-201ENST00000273411 PHF23Q9BUL5 403 aaPredicted RBP18.41■□□□□ 0.54
RPL39P5-201ENST00000273411 FOXD1Q16676 465 aa17.41■□□□□ 0.38
RPL39P5-201ENST00000273411 PLPPR3Q6T4P5 718 aa16.47■□□□□ 0.23
RPL39P5-201ENST00000273411 MSH5O43196 834 aa16.34■□□□□ 0.21
RPL39P5-201ENST00000273411 PIAS4Q8N2W9 510 aaPredicted RBP16.22■□□□□ 0.19
RPL39P5-201ENST00000273411 PPP6R1Q9UPN7 881 aa16.2■□□□□ 0.18
RPL39P5-201ENST00000273411 ADRA2BP18089 450 aa16.12■□□□□ 0.17
RPL39P5-201ENST00000273411 POTEDQ86YR6 584 aa16.1■□□□□ 0.17
RPL39P5-201ENST00000273411 MAPK8IP2Q13387 824 aaPredicted RBP14.84□□□□□ -0.03
RPL39P5-201ENST00000273411 DMRT2Q9Y5R5 561 aa14.8□□□□□ -0.04
RPL39P5-201ENST00000273411 SCAF1Q9H7N4 1312 aaKnown RBP14.78□□□□□ -0.04
RPL39P5-201ENST00000273411 PPP4R3CPQ6ZMV5 832 aa14.41□□□□□ -0.1
RPL39P5-201ENST00000273411 HOXD11P31277 338 aaPredicted RBP14.24□□□□□ -0.13
RPL39P5-201ENST00000273411 CNKSR2Q8WXI2 1034 aa14.18□□□□□ -0.14
RPL39P5-201ENST00000273411 KCNA4P22459 653 aa14.11□□□□□ -0.15
RPL39P5-201ENST00000273411 DCAF8L1A6NGE4 600 aa14.1□□□□□ -0.15
RPL39P5-201ENST00000273411 RNF216Q9NWF9 866 aaPredicted RBP14.09□□□□□ -0.15
RPL39P5-201ENST00000273411 CACNB1Q02641 598 aaPredicted RBP14.04□□□□□ -0.16
RPL39P5-201ENST00000273411 RNF39Q9H2S5 420 aa13.95□□□□□ -0.18
RPL39P5-201ENST00000273411 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
RPL39P5-201ENST00000273411 NCBP3Q53F19 620 aaKnown RBP13.83□□□□□ -0.2
RPL39P5-201ENST00000273411 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
RPL39P5-201ENST00000273411 C1QBPQ07021 282 aaKnown RBP13.74□□□□□ -0.21
RPL39P5-201ENST00000273411 NISCHQ9Y2I1 1504 aa13.66□□□□□ -0.22
RPL39P5-201ENST00000273411 NPM3O75607 178 aaKnown RBP13.63□□□□□ -0.23
RPL39P5-201ENST00000273411 ABCC9O60706 1549 aa13.58□□□□□ -0.24
RPL39P5-201ENST00000273411 SLC4A1APQ9BWU0 796 aaKnown RBP13.54□□□□□ -0.24
RPL39P5-201ENST00000273411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.49□□□□□ -0.25
RPL39P5-201ENST00000273411 CSRNP3Q8WYN3 585 aa13.47□□□□□ -0.25
RPL39P5-201ENST00000273411 U3KPZ7 1027 aaPredicted RBP13.23□□□□□ -0.29
RPL39P5-201ENST00000273411 SLC4A2P04920 1241 aa13.06□□□□□ -0.32
RPL39P5-201ENST00000273411 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
RPL39P5-201ENST00000273411 ZBTB22O15209 634 aa13.01□□□□□ -0.33
RPL39P5-201ENST00000273411 CAPN15O75808 1086 aa13.01□□□□□ -0.33
RPL39P5-201ENST00000273411 DSG3P32926 999 aa13.01□□□□□ -0.33
RPL39P5-201ENST00000273411 DNAJC5Q9H3Z4 198 aa13.01□□□□□ -0.33
RPL39P5-201ENST00000273411 APLP2Q06481 763 aa12.85□□□□□ -0.35
RPL39P5-201ENST00000273411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.83□□□□□ -0.36
RPL39P5-201ENST00000273411 HNRNPUL2Q1KMD3 747 aaKnown RBP12.83□□□□□ -0.36
RPL39P5-201ENST00000273411 ZNF219Q9P2Y4 722 aaPredicted RBP12.79□□□□□ -0.36
RPL39P5-201ENST00000273411 TRHP20396 242 aaPredicted RBP12.77□□□□□ -0.37
RPL39P5-201ENST00000273411 FOXD4L1Q9NU39 408 aa12.76□□□□□ -0.37
RPL39P5-201ENST00000273411 SAMD1Q6SPF0 538 aaPredicted RBP12.75□□□□□ -0.37
RPL39P5-201ENST00000273411 ABCB7O75027 752 aa12.69□□□□□ -0.38
RPL39P5-201ENST00000273411 CCDC180Q9P1Z9 1646 aa12.68□□□□□ -0.38
RPL39P5-201ENST00000273411 MYCNP04198 464 aaPredicted RBP12.61□□□□□ -0.39
RPL39P5-201ENST00000273411 POTEHQ6S545 545 aa12.6□□□□□ -0.39
RPL39P5-201ENST00000273411 PABPN1Q86U42 306 aaKnown RBP eCLIP12.47□□□□□ -0.41
RPL39P5-201ENST00000273411 RB1CC1Q8TDY2 1594 aa12.45□□□□□ -0.42
RPL39P5-201ENST00000273411 POLA2Q14181 598 aa12.44□□□□□ -0.42
RPL39P5-201ENST00000273411 UNC13AQ9UPW8 1703 aa12.43□□□□□ -0.42
RPL39P5-201ENST00000273411 RBM42Q9BTD8 480 aaKnown RBP12.42□□□□□ -0.42
RPL39P5-201ENST00000273411 ATF5Q9Y2D1 282 aaPredicted RBP12.32□□□□□ -0.44
RPL39P5-201ENST00000273411 BICRAQ9NZM4 1560 aa12.29□□□□□ -0.44
RPL39P5-201ENST00000273411 CECR2Q9BXF3 1484 aa12.27□□□□□ -0.44
RPL39P5-201ENST00000273411 RTN4Q9NQC3 1192 aaKnown RBP12.25□□□□□ -0.45
RPL39P5-201ENST00000273411 CC2D2AQ9P2K1 1620 aa12.25□□□□□ -0.45
RPL39P5-201ENST00000273411 ATXN8OSP0DMR3 200 aa12.24□□□□□ -0.45
RPL39P5-201ENST00000273411 AMER1Q5JTC6 1135 aaPredicted RBP12.22□□□□□ -0.45
RPL39P5-201ENST00000273411 ZBTB12Q9Y330 459 aaPredicted RBP12.21□□□□□ -0.45
RPL39P5-201ENST00000273411 CHRDL2Q6WN34 429 aa12.18□□□□□ -0.46
RPL39P5-201ENST00000273411 SLC24A1O60721 1099 aa12.14□□□□□ -0.47
RPL39P5-201ENST00000273411 NACADO15069 1562 aa12.13□□□□□ -0.47
RPL39P5-201ENST00000273411 FKBP8Q14318 412 aa12.12□□□□□ -0.47
RPL39P5-201ENST00000273411 AKT1S1Q96B36 256 aa12.12□□□□□ -0.47
RPL39P5-201ENST00000273411 TRIM41Q8WV44 630 aa12.08□□□□□ -0.48
RPL39P5-201ENST00000273411 OSCARQ8IYS5 282 aa12.03□□□□□ -0.48
RPL39P5-201ENST00000273411 REM2Q8IYK8 340 aaPredicted RBP11.99□□□□□ -0.49
RPL39P5-201ENST00000273411 EIF4G1Q04637 1599 aaKnown RBP11.97□□□□□ -0.49
RPL39P5-201ENST00000273411 CUX2O14529 1486 aa11.97□□□□□ -0.49
RPL39P5-201ENST00000273411 PIP4P2Q8N4L2 257 aa11.87□□□□□ -0.51
RPL39P5-201ENST00000273411 PITPNM1O00562 1244 aa11.85□□□□□ -0.51
RPL39P5-201ENST00000273411 FBLN2P98095 1184 aa11.83□□□□□ -0.52
RPL39P5-201ENST00000273411 SPDYE2BA6NHP3 402 aa11.82□□□□□ -0.52
RPL39P5-201ENST00000273411 SPDYE6P0CI01 402 aa11.82□□□□□ -0.52
RPL39P5-201ENST00000273411 SPDYE2Q495Y8 402 aa11.82□□□□□ -0.52
RPL39P5-201ENST00000273411 DCAF8L2P0C7V8 631 aa11.81□□□□□ -0.52
RPL39P5-201ENST00000273411 FXR2P51116 673 aaKnown RBP eCLIP11.8□□□□□ -0.52
RPL39P5-201ENST00000273411 SHROOM4Q9ULL8 1493 aa11.77□□□□□ -0.52
RPL39P5-201ENST00000273411 MKRN4PQ13434 485 aaPredicted RBP11.76□□□□□ -0.53
RPL39P5-201ENST00000273411 SP7Q8TDD2 431 aaPredicted RBP11.76□□□□□ -0.53
RPL39P5-201ENST00000273411 SSUH2Q9Y2M2 353 aa11.67□□□□□ -0.54
RPL39P5-201ENST00000273411 ERCC6Q03468 1493 aa11.67□□□□□ -0.54
RPL39P5-201ENST00000273411 HAX1O00165 279 aa11.65□□□□□ -0.54
RPL39P5-201ENST00000273411 ZNF692Q9BU19 519 aaPredicted RBP11.63□□□□□ -0.55
RPL39P5-201ENST00000273411 MYO15BQ96JP2 1530 aa11.62□□□□□ -0.55
RPL39P5-201ENST00000273411 SPDYE1Q8NFV5 336 aaPredicted RBP11.62□□□□□ -0.55
RPL39P5-201ENST00000273411 CLEC11AQ9Y240 323 aa11.56□□□□□ -0.56
RPL39P5-201ENST00000273411 THOC2Q8NI27 1593 aaKnown RBP11.54□□□□□ -0.56
RPL39P5-201ENST00000273411 SCRIBQ14160 1630 aa11.54□□□□□ -0.56
RPL39P5-201ENST00000273411 PRKAR2AP13861 404 aaKnown RBP11.53□□□□□ -0.56
RPL39P5-201ENST00000273411 EVX2Q03828 476 aa11.52□□□□□ -0.57
RPL39P5-201ENST00000273411 FBXO3Q9UK99 471 aa11.48□□□□□ -0.57
RPL39P5-201ENST00000273411 NESP48681 1621 aa11.47□□□□□ -0.57
RPL39P5-201ENST00000273411 SPDYE4A6NLX3 237 aa11.46□□□□□ -0.57
RPL39P5-201ENST00000273411 C19orf67A6NJJ6 358 aa11.42□□□□□ -0.58
RPL39P5-201ENST00000273411 PRR29P0C7W0 189 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms