Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AP000866.6-201ENST00000638898 3579 ntBASIC6.83□□□□□ -1.32
AMBRA1Q9C0C7 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
AMBRA1Q9C0C7 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
AMBRA1Q9C0C7 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.83□□□□□ -1.32
AMBRA1Q9C0C7 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
AMBRA1Q9C0C7 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.83□□□□□ -1.32
AMBRA1Q9C0C7 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.83□□□□□ -1.32
AMBRA1Q9C0C7 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
AMBRA1Q9C0C7 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
AMBRA1Q9C0C7 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
AMBRA1Q9C0C7 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
AMBRA1Q9C0C7 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
AMBRA1Q9C0C7 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
AMBRA1Q9C0C7 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
AMBRA1Q9C0C7 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
AMBRA1Q9C0C7 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.83□□□□□ -1.32
AMBRA1Q9C0C7 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
AMBRA1Q9C0C7 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
AMBRA1Q9C0C7 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 RNA5SP218-201ENST00000363188 109 ntBASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 AC074375.1-201ENST00000372993 192 ntBASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 SUMO2P13-201ENST00000403109 272 ntBASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 RN7SKP225-201ENST00000410405 352 ntBASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 IFNA12P-201ENST00000413147 571 ntBASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 DDX11L10-201ENST00000430178 571 ntBASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 RPL7P14-201ENST00000449851 741 ntBASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 AC007000.1-201ENST00000453064 794 ntBASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 RPS14P7-201ENST00000473701 448 ntBASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 AC066616.1-201ENST00000486795 413 ntBASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 AP001994.1-201ENST00000527539 826 ntBASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 HIGD1AP9-201ENST00000550710 279 ntBASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 AC009268.1-201ENST00000561352 1203 ntBASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 AC007136.1-201ENST00000589141 199 ntBASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 AC129492.5-201ENST00000603489 315 ntBASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 AC020763.5-201ENST00000623298 430 ntBASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 AC183089.2-201ENST00000637931 916 ntBASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 CASC19-232ENST00000641480 1244 ntBASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 AC100810.3-201ENST00000633189 2240 ntBASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC6.82□□□□□ -1.32
AMBRA1Q9C0C7 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 SSX6-201ENST00000376932 562 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 OR1F12-201ENST00000402365 945 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms