RNA–Protein interactions for RNA: ENST00000514152.5

SH3D19-210, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SH3D19, Length 5,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-210ENST00000514152 NISCHQ9Y2I1 1504 aa11.72□□□□□ -0.53
SH3D19-210ENST00000514152 MYT1Q01538 1121 aa11.71□□□□□ -0.53
SH3D19-210ENST00000514152 PELP1Q8IZL8 1130 aaKnown RBP11.67□□□□□ -0.54
SH3D19-210ENST00000514152 SUPT5HO00267 1087 aaKnown RBP11.58□□□□□ -0.56
SH3D19-210ENST00000514152 DCAF8L2P0C7V8 631 aa11.52□□□□□ -0.56
SH3D19-210ENST00000514152 PCGF6Q9BYE7 350 aa11.34□□□□□ -0.59
SH3D19-210ENST00000514152 SHROOM4Q9ULL8 1493 aa11.29□□□□□ -0.6
SH3D19-210ENST00000514152 ZEB1P37275 1124 aaPredicted RBP11.28□□□□□ -0.6
SH3D19-210ENST00000514152 RANGAP1P46060 587 aaPredicted RBP11.27□□□□□ -0.6
SH3D19-210ENST00000514152 CENPBP07199 599 aaPredicted RBP11.27□□□□□ -0.61
SH3D19-210ENST00000514152 EHMT2Q96KQ7 1210 aa11.23□□□□□ -0.61
SH3D19-210ENST00000514152 TTBK1Q5TCY1 1321 aaPredicted RBP11.16□□□□□ -0.62
SH3D19-210ENST00000514152 HRCP23327 699 aa11.16□□□□□ -0.62
SH3D19-210ENST00000514152 SLC24A1O60721 1099 aa11.08□□□□□ -0.64
SH3D19-210ENST00000514152 ERICH6Q7L0X2 663 aa11.08□□□□□ -0.64
SH3D19-210ENST00000514152 CCER1Q8TC90 406 aaPredicted RBP10.96□□□□□ -0.65
SH3D19-210ENST00000514152 TRIM26Q12899 539 aaPredicted RBP10.91□□□□□ -0.66
SH3D19-210ENST00000514152 APLP2Q06481 763 aa10.89□□□□□ -0.67
SH3D19-210ENST00000514152 FAM9AQ8IZU1 332 aaPredicted RBP10.85□□□□□ -0.67
SH3D19-210ENST00000514152 YTHDC1Q96MU7 727 aaKnown RBP10.83□□□□□ -0.68
SH3D19-210ENST00000514152 PPARGC1BQ86YN6 1023 aaKnown RBP10.8□□□□□ -0.68
SH3D19-210ENST00000514152 NEFLP07196 543 aa10.78□□□□□ -0.68
SH3D19-210ENST00000514152 TRIM41Q8WV44 630 aa10.75□□□□□ -0.69
SH3D19-210ENST00000514152 CHIC1Q5VXU3 224 aa10.64□□□□□ -0.71
SH3D19-210ENST00000514152 MYT1LQ9UL68 1186 aa10.61□□□□□ -0.71
SH3D19-210ENST00000514152 DIEXFQ68CQ4 756 aaKnown RBP10.59□□□□□ -0.71
SH3D19-210ENST00000514152 GTF3C3Q9Y5Q9 886 aa10.58□□□□□ -0.72
SH3D19-210ENST00000514152 LOC105371045A0A1W2PR82 267 aa10.54□□□□□ -0.72
SH3D19-210ENST00000514152 ACIN1Q9UKV3 1341 aaKnown RBP10.52□□□□□ -0.73
SH3D19-210ENST00000514152 UBTFP17480 764 aaKnown RBP10.49□□□□□ -0.73
SH3D19-210ENST00000514152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.43□□□□□ -0.74
SH3D19-210ENST00000514152 RTL5Q5HYW3 569 aaPredicted RBP10.39□□□□□ -0.75
SH3D19-210ENST00000514152 DAXXQ9UER7 740 aaPredicted RBP10.36□□□□□ -0.75
SH3D19-210ENST00000514152 POLR3GLQ9BT43 218 aa10.34□□□□□ -0.75
SH3D19-210ENST00000514152 SCAF1Q9H7N4 1312 aaKnown RBP10.34□□□□□ -0.75
SH3D19-210ENST00000514152 CLSPNQ9HAW4 1339 aa10.33□□□□□ -0.76
SH3D19-210ENST00000514152 DCAF1Q9Y4B6 1507 aa10.31□□□□□ -0.76
SH3D19-210ENST00000514152 ZNF316A6NFI3 1004 aaPredicted RBP10.31□□□□□ -0.76
SH3D19-210ENST00000514152 HNRNPUL2Q1KMD3 747 aaKnown RBP10.3□□□□□ -0.76
SH3D19-210ENST00000514152 BCANQ96GW7 911 aa10.25□□□□□ -0.77
SH3D19-210ENST00000514152 ATP1B4Q9UN42 357 aaPredicted RBP10.24□□□□□ -0.77
SH3D19-210ENST00000514152 CDK11AQ9UQ88 783 aaPredicted RBP10.24□□□□□ -0.77
SH3D19-210ENST00000514152 NEUROD1Q13562 356 aa10.24□□□□□ -0.77
SH3D19-210ENST00000514152 ITGAEP38570 1179 aa10.16□□□□□ -0.78
SH3D19-210ENST00000514152 ANP32CO43423 234 aa10.11□□□□□ -0.79
SH3D19-210ENST00000514152 HAP1P54257 671 aaPredicted RBP10.09□□□□□ -0.79
SH3D19-210ENST00000514152 AMER1Q5JTC6 1135 aaPredicted RBP10.07□□□□□ -0.8
SH3D19-210ENST00000514152 ANP32EQ9BTT0 268 aa10.07□□□□□ -0.8
SH3D19-210ENST00000514152 ANP32AP39687 249 aaKnown RBP10.07□□□□□ -0.8
SH3D19-210ENST00000514152 CCDC180Q9P1Z9 1646 aa10.05□□□□□ -0.8
SH3D19-210ENST00000514152 FKBP8Q14318 412 aa10.05□□□□□ -0.8
SH3D19-210ENST00000514152 GLIPR1L2Q4G1C9 344 aa10.04□□□□□ -0.8
SH3D19-210ENST00000514152 EIF5BO60841 1220 aaKnown RBP10□□□□□ -0.81
SH3D19-210ENST00000514152 MYO15BQ96JP2 1530 aa9.97□□□□□ -0.81
SH3D19-210ENST00000514152 CNGB1Q14028 1251 aaPredicted RBP9.96□□□□□ -0.82
SH3D19-210ENST00000514152 MIER1Q8N108 512 aa9.95□□□□□ -0.82
SH3D19-210ENST00000514152 BCL11AQ9H165 835 aa9.94□□□□□ -0.82
SH3D19-210ENST00000514152 FAM50AQ14320 339 aaKnown RBP9.92□□□□□ -0.82
SH3D19-210ENST00000514152 NBR1Q14596 966 aa9.88□□□□□ -0.83
SH3D19-210ENST00000514152 HOMEZQ8IX15 550 aa9.88□□□□□ -0.83
SH3D19-210ENST00000514152 NPM2Q86SE8 214 aaKnown RBP9.87□□□□□ -0.83
SH3D19-210ENST00000514152 C14orf37Q86TY3 774 aa9.87□□□□□ -0.83
SH3D19-210ENST00000514152 ZBTB47Q9UFB7 747 aaPredicted RBP9.87□□□□□ -0.83
SH3D19-210ENST00000514152 HNRNPUQ00839 825 aaKnown RBP eCLIP9.84□□□□□ -0.83
SH3D19-210ENST00000514152 CSRNP3Q8WYN3 585 aa9.82□□□□□ -0.84
SH3D19-210ENST00000514152 TRIM52Q96A61 297 aa9.82□□□□□ -0.84
SH3D19-210ENST00000514152 SUPT16HQ9Y5B9 1047 aaKnown RBP9.81□□□□□ -0.84
SH3D19-210ENST00000514152 ZCCHC6Q5VYS8 1495 aaKnown RBP9.81□□□□□ -0.84
SH3D19-210ENST00000514152 DDX10Q13206 875 aaKnown RBP9.8□□□□□ -0.84
SH3D19-210ENST00000514152 PODXL2Q9NZ53 605 aa9.8□□□□□ -0.84
SH3D19-210ENST00000514152 CDK11BP21127 795 aaKnown RBP9.77□□□□□ -0.85
SH3D19-210ENST00000514152 CCDC136Q96JN2 1154 aa9.77□□□□□ -0.85
SH3D19-210ENST00000514152 ANP32BQ92688 251 aaKnown RBP9.75□□□□□ -0.85
SH3D19-210ENST00000514152 TONSLQ96HA7 1378 aa9.74□□□□□ -0.85
SH3D19-210ENST00000514152 RTN4Q9NQC3 1192 aaKnown RBP9.73□□□□□ -0.85
SH3D19-210ENST00000514152 TULP1O00294 542 aaPredicted RBP9.73□□□□□ -0.85
SH3D19-210ENST00000514152 HMGB1P09429 215 aaKnown RBP9.72□□□□□ -0.85
SH3D19-210ENST00000514152 CANXP27824 592 aaKnown RBP9.72□□□□□ -0.85
SH3D19-210ENST00000514152 TPRNQ4KMQ1 711 aa9.71□□□□□ -0.85
SH3D19-210ENST00000514152 FAM9BQ8IZU0 186 aa9.71□□□□□ -0.86
SH3D19-210ENST00000514152 DDRGK1Q96HY6 314 aa9.71□□□□□ -0.86
SH3D19-210ENST00000514152 IRX6P78412 446 aaPredicted RBP9.7□□□□□ -0.86
SH3D19-210ENST00000514152 ZNF326Q5BKZ1 582 aaKnown RBP9.69□□□□□ -0.86
SH3D19-210ENST00000514152 UPF2Q9HAU5 1272 aaKnown RBP9.69□□□□□ -0.86
SH3D19-210ENST00000514152 NOP58Q9Y2X3 529 aaKnown RBP9.69□□□□□ -0.86
SH3D19-210ENST00000514152 DEKP35659 375 aaKnown RBP9.68□□□□□ -0.86
SH3D19-210ENST00000514152 PPM1GO15355 546 aaPredicted RBP9.68□□□□□ -0.86
SH3D19-210ENST00000514152 RBM19Q9Y4C8 960 aaKnown RBP9.67□□□□□ -0.86
SH3D19-210ENST00000514152 ABCC9O60706 1549 aa9.66□□□□□ -0.86
SH3D19-210ENST00000514152 NEFMP07197 916 aa9.66□□□□□ -0.86
SH3D19-210ENST00000514152 SLC4A1APQ9BWU0 796 aaKnown RBP9.66□□□□□ -0.86
SH3D19-210ENST00000514152 TSHZ2Q9NRE2 1034 aa9.66□□□□□ -0.86
SH3D19-210ENST00000514152 ERICH6BQ5W0A0 696 aa9.65□□□□□ -0.86
SH3D19-210ENST00000514152 PPP4R2Q9NY27 417 aa9.65□□□□□ -0.87
SH3D19-210ENST00000514152 MRS2Q9HD23 443 aa9.64□□□□□ -0.87
SH3D19-210ENST00000514152 ARID3AQ99856 593 aa9.64□□□□□ -0.87
SH3D19-210ENST00000514152 CEP162Q5TB80 1403 aa9.63□□□□□ -0.87
SH3D19-210ENST00000514152 SCRIBQ14160 1630 aa9.61□□□□□ -0.87
SH3D19-210ENST00000514152 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.6□□□□□ -0.87
SH3D19-210ENST00000514152 HSP90AA1P07900 732 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms