Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC233289.1-201ENST00000403700 508 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 EEF1A1P34-201ENST00000419888 1267 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 OR7E36P-201ENST00000419933 954 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AC245047.2-201ENST00000441060 530 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AL137074.1-201ENST00000442640 465 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 SYT14P1-201ENST00000481459 721 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 RN7SL423P-201ENST00000486202 304 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 RN7SL388P-201ENST00000498736 339 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AC010409.2-201ENST00000505780 478 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AC087373.1-201ENST00000524920 491 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AL391156.1-201ENST00000554965 554 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AC090888.1-201ENST00000561335 1141 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AC009097.3-201ENST00000563557 1018 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 DNM1P31-201ENST00000564149 696 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 EXOSC3P2-201ENST00000594464 497 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AL031775.1-201ENST00000607014 887 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AC104083.1-201ENST00000569449 2615 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC8.09□□□□□ -1.12
SHKBP1Q8TBC3 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC8.09□□□□□ -1.12
SHKBP1Q8TBC3 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
SHKBP1Q8TBC3 AL157713.1-201ENST00000379752 1531 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 AC036108.4-201ENST00000611654 2516 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 MIPEPP2-201ENST00000422560 1819 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 RNU5E-10P-201ENST00000363506 118 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 RNU6-819P-201ENST00000364116 107 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 VDAC1P8-201ENST00000406025 853 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 DHFRP2-201ENST00000414224 547 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 AL359885.1-201ENST00000415786 903 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 TIMM9P2-201ENST00000419324 266 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 PPIL1P1-201ENST00000423936 499 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 NMNAT1P2-201ENST00000435192 860 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 MAPRE1P3-201ENST00000435438 796 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 AL161454.1-201ENST00000446226 569 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 MTCYBP16-201ENST00000509187 1129 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 AC008549.1-201ENST00000512900 643 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 MTCO3P27-201ENST00000514397 196 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 SNORA70.17-201ENST00000516449 133 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 COX6CP11-201ENST00000555293 229 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 AL049869.4-201ENST00000555669 178 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms