RNA–Protein interactions for RNA: ENST00000561335.2

AC090888.1-201, humanhuman

BASIC

Gene AC090888.1, Length 1,141 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090888.1-201ENST00000561335 AEBP2Q6ZN18 517 aaPredicted RBP29.02■■■□□ 2.24
AC090888.1-201ENST00000561335 CHIC1Q5VXU3 224 aa26.94■■□□□ 1.9
AC090888.1-201ENST00000561335 SENP3Q9H4L4 574 aaPredicted RBP24.82■■□□□ 1.56
AC090888.1-201ENST00000561335 PHF23Q9BUL5 403 aaPredicted RBP24.37■■□□□ 1.49
AC090888.1-201ENST00000561335 POTEDQ86YR6 584 aa24.07■■□□□ 1.44
AC090888.1-201ENST00000561335 FOXD1Q16676 465 aa23.38■■□□□ 1.33
AC090888.1-201ENST00000561335 MSH5O43196 834 aa22.28■■□□□ 1.16
AC090888.1-201ENST00000561335 PLPPR3Q6T4P5 718 aa21.51■■□□□ 1.03
AC090888.1-201ENST00000561335 PIAS4Q8N2W9 510 aaPredicted RBP21.5■■□□□ 1.03
AC090888.1-201ENST00000561335 PPP6R1Q9UPN7 881 aa20.91■□□□□ 0.94
AC090888.1-201ENST00000561335 ADRA2BP18089 450 aa20.8■□□□□ 0.92
AC090888.1-201ENST00000561335 CACNB1Q02641 598 aaPredicted RBP19.97■□□□□ 0.79
AC090888.1-201ENST00000561335 DMRT2Q9Y5R5 561 aa19.51■□□□□ 0.71
AC090888.1-201ENST00000561335 MAPK8IP2Q13387 824 aaPredicted RBP19.47■□□□□ 0.71
AC090888.1-201ENST00000561335 SCAF1Q9H7N4 1312 aaKnown RBP19.19■□□□□ 0.66
AC090888.1-201ENST00000561335 RNF39Q9H2S5 420 aa18.95■□□□□ 0.62
AC090888.1-201ENST00000561335 PPP4R3CPQ6ZMV5 832 aa18.84■□□□□ 0.61
AC090888.1-201ENST00000561335 DCAF8L1A6NGE4 600 aa18.8■□□□□ 0.6
AC090888.1-201ENST00000561335 POTEHQ6S545 545 aa18.58■□□□□ 0.56
AC090888.1-201ENST00000561335 C1QBPQ07021 282 aaKnown RBP18.54■□□□□ 0.56
AC090888.1-201ENST00000561335 CNKSR2Q8WXI2 1034 aa18.47■□□□□ 0.55
AC090888.1-201ENST00000561335 HOXD11P31277 338 aaPredicted RBP18.29■□□□□ 0.52
AC090888.1-201ENST00000561335 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.52
AC090888.1-201ENST00000561335 RNF216Q9NWF9 866 aaPredicted RBP18.24■□□□□ 0.51
AC090888.1-201ENST00000561335 NPM3O75607 178 aaKnown RBP17.88■□□□□ 0.45
AC090888.1-201ENST00000561335 DNAJC5BQ9UF47 199 aa17.81■□□□□ 0.44
AC090888.1-201ENST00000561335 KCNA4P22459 653 aa17.69■□□□□ 0.42
AC090888.1-201ENST00000561335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.51■□□□□ 0.39
AC090888.1-201ENST00000561335 DSG3P32926 999 aa17.32■□□□□ 0.36
AC090888.1-201ENST00000561335 SPINK5Q9NQ38 1064 aaPredicted RBP17.12■□□□□ 0.33
AC090888.1-201ENST00000561335 CAPN15O75808 1086 aa17.09■□□□□ 0.33
AC090888.1-201ENST00000561335 U3KPZ7 1027 aaPredicted RBP17.06■□□□□ 0.32
AC090888.1-201ENST00000561335 SLC4A2P04920 1241 aa16.98■□□□□ 0.31
AC090888.1-201ENST00000561335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
AC090888.1-201ENST00000561335 APLP2Q06481 763 aa16.8■□□□□ 0.28
AC090888.1-201ENST00000561335 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
AC090888.1-201ENST00000561335 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
AC090888.1-201ENST00000561335 SP7Q8TDD2 431 aaPredicted RBP16.79■□□□□ 0.28
AC090888.1-201ENST00000561335 CHRDL2Q6WN34 429 aa16.7■□□□□ 0.26
AC090888.1-201ENST00000561335 SAMD1Q6SPF0 538 aaPredicted RBP16.67■□□□□ 0.26
AC090888.1-201ENST00000561335 ABCB7O75027 752 aa16.64■□□□□ 0.25
AC090888.1-201ENST00000561335 MYCNP04198 464 aaPredicted RBP16.6■□□□□ 0.25
AC090888.1-201ENST00000561335 TRHP20396 242 aaPredicted RBP16.59■□□□□ 0.25
AC090888.1-201ENST00000561335 ZNF219Q9P2Y4 722 aaPredicted RBP16.59■□□□□ 0.25
AC090888.1-201ENST00000561335 FOXD4L1Q9NU39 408 aa16.51■□□□□ 0.23
AC090888.1-201ENST00000561335 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.23
AC090888.1-201ENST00000561335 ZBTB22O15209 634 aa16.2■□□□□ 0.18
AC090888.1-201ENST00000561335 POLA2Q14181 598 aa16.16■□□□□ 0.18
AC090888.1-201ENST00000561335 HAX1O00165 279 aa16.08■□□□□ 0.16
AC090888.1-201ENST00000561335 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
AC090888.1-201ENST00000561335 PIP4P2Q8N4L2 257 aa16.05■□□□□ 0.16
AC090888.1-201ENST00000561335 ATXN8OSP0DMR3 200 aa16■□□□□ 0.15
AC090888.1-201ENST00000561335 ZBTB12Q9Y330 459 aaPredicted RBP15.93■□□□□ 0.14
AC090888.1-201ENST00000561335 EVX2Q03828 476 aa15.88■□□□□ 0.13
AC090888.1-201ENST00000561335 PLSCR2Q9NRY7 297 aa15.87■□□□□ 0.13
AC090888.1-201ENST00000561335 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
AC090888.1-201ENST00000561335 REM2Q8IYK8 340 aaPredicted RBP15.75■□□□□ 0.11
AC090888.1-201ENST00000561335 LHX8Q68G74 356 aa15.73■□□□□ 0.11
AC090888.1-201ENST00000561335 FXR2P51116 673 aaKnown RBP eCLIP15.71■□□□□ 0.11
AC090888.1-201ENST00000561335 CSRNP3Q8WYN3 585 aa15.67■□□□□ 0.1
AC090888.1-201ENST00000561335 EHMT2Q96KQ7 1210 aa15.63■□□□□ 0.09
AC090888.1-201ENST00000561335 PITPNM1O00562 1244 aa15.62■□□□□ 0.09
AC090888.1-201ENST00000561335 FBLN2P98095 1184 aa15.62■□□□□ 0.09
AC090888.1-201ENST00000561335 OSCARQ8IYS5 282 aa15.61■□□□□ 0.09
AC090888.1-201ENST00000561335 SPDYE2BA6NHP3 402 aa15.4■□□□□ 0.06
AC090888.1-201ENST00000561335 SPDYE6P0CI01 402 aa15.4■□□□□ 0.06
AC090888.1-201ENST00000561335 SPDYE2Q495Y8 402 aa15.4■□□□□ 0.06
AC090888.1-201ENST00000561335 GABBR2O75899 941 aa15.38■□□□□ 0.05
AC090888.1-201ENST00000561335 MKRN4PQ13434 485 aaPredicted RBP15.36■□□□□ 0.05
AC090888.1-201ENST00000561335 C19orf67A6NJJ6 358 aa15.27■□□□□ 0.04
AC090888.1-201ENST00000561335 ZNF692Q9BU19 519 aaPredicted RBP15.26■□□□□ 0.03
AC090888.1-201ENST00000561335 PRKAR2AP13861 404 aaKnown RBP15.18■□□□□ 0.02
AC090888.1-201ENST00000561335 SSUH2Q9Y2M2 353 aa15.15■□□□□ 0.02
AC090888.1-201ENST00000561335 SPDYE1Q8NFV5 336 aaPredicted RBP15.11■□□□□ 0.01
AC090888.1-201ENST00000561335 POTEIP0CG38 1075 aa15.1■□□□□ 0.01
AC090888.1-201ENST00000561335 CLEC11AQ9Y240 323 aa15.08■□□□□ 0
AC090888.1-201ENST00000561335 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.01
AC090888.1-201ENST00000561335 POTEMA6NI47 508 aa14.9□□□□□ -0.02
AC090888.1-201ENST00000561335 PRR29P0C7W0 189 aa14.86□□□□□ -0.03
AC090888.1-201ENST00000561335 SPDYE4A6NLX3 237 aa14.83□□□□□ -0.04
AC090888.1-201ENST00000561335 POTEGQ6S5H5 508 aa14.81□□□□□ -0.04
AC090888.1-201ENST00000561335 CHADLQ6NUI6 762 aa14.78□□□□□ -0.04
AC090888.1-201ENST00000561335 OTUD5Q96G74 571 aa14.75□□□□□ -0.05
AC090888.1-201ENST00000561335 STAG3Q9UJ98 1225 aa14.72□□□□□ -0.05
AC090888.1-201ENST00000561335 DCBLD2Q96PD2 775 aa14.64□□□□□ -0.07
AC090888.1-201ENST00000561335 CD44P16070 742 aaKnown RBP14.61□□□□□ -0.07
AC090888.1-201ENST00000561335 PCDH10Q9P2E7 1040 aa14.61□□□□□ -0.07
AC090888.1-201ENST00000561335 POTEB2H3BUK9 544 aa14.58□□□□□ -0.08
AC090888.1-201ENST00000561335 CLCN6P51797 869 aa14.52□□□□□ -0.09
AC090888.1-201ENST00000561335 FARP1Q9Y4F1 1045 aaPredicted RBP14.52□□□□□ -0.09
AC090888.1-201ENST00000561335 CREBZFQ9NS37 354 aa14.44□□□□□ -0.1
AC090888.1-201ENST00000561335 PROM2Q8N271 834 aa14.41□□□□□ -0.1
AC090888.1-201ENST00000561335 LCE2DQ5TA82 110 aaPredicted RBP14.34□□□□□ -0.11
AC090888.1-201ENST00000561335 NPM1P06748 294 aaKnown RBP eCLIP14.31□□□□□ -0.12
AC090888.1-201ENST00000561335 ZNF579Q8NAF0 562 aaKnown RBP14.31□□□□□ -0.12
AC090888.1-201ENST00000561335 GALR2O43603 387 aaPredicted RBP14.29□□□□□ -0.12
AC090888.1-201ENST00000561335 FKBP8Q14318 412 aa14.27□□□□□ -0.13
AC090888.1-201ENST00000561335 PAK3O75914 559 aaPredicted RBP14.26□□□□□ -0.13
AC090888.1-201ENST00000561335 PLEKHG5O94827 1062 aa14.24□□□□□ -0.13
AC090888.1-201ENST00000561335 ZRANB1Q9UGI0 708 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms