RNA–Protein interactions for RNA: ENST00000437232.5

VIM-AS1-201, VIM antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VIM-AS1, Length 1,351 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-201ENST00000437232 AEBP2Q6ZN18 517 aaPredicted RBP28.46■■■□□ 2.15
VIM-AS1-201ENST00000437232 CHIC1Q5VXU3 224 aa27.08■■□□□ 1.93
VIM-AS1-201ENST00000437232 SENP3Q9H4L4 574 aaPredicted RBP24.23■■□□□ 1.47
VIM-AS1-201ENST00000437232 PHF23Q9BUL5 403 aaPredicted RBP23.94■■□□□ 1.42
VIM-AS1-201ENST00000437232 FOXD1Q16676 465 aa22.6■■□□□ 1.21
VIM-AS1-201ENST00000437232 PLPPR3Q6T4P5 718 aa21.67■■□□□ 1.06
VIM-AS1-201ENST00000437232 PPP6R1Q9UPN7 881 aa21.2■□□□□ 0.98
VIM-AS1-201ENST00000437232 ADRA2BP18089 450 aa21.15■□□□□ 0.98
VIM-AS1-201ENST00000437232 PIAS4Q8N2W9 510 aaPredicted RBP21.15■□□□□ 0.98
VIM-AS1-201ENST00000437232 MSH5O43196 834 aa21.09■□□□□ 0.97
VIM-AS1-201ENST00000437232 POTEDQ86YR6 584 aa20.46■□□□□ 0.87
VIM-AS1-201ENST00000437232 MAPK8IP2Q13387 824 aaPredicted RBP19.41■□□□□ 0.7
VIM-AS1-201ENST00000437232 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
VIM-AS1-201ENST00000437232 DMRT2Q9Y5R5 561 aa19.22■□□□□ 0.67
VIM-AS1-201ENST00000437232 PPP4R3CPQ6ZMV5 832 aa19.02■□□□□ 0.64
VIM-AS1-201ENST00000437232 CNKSR2Q8WXI2 1034 aa18.63■□□□□ 0.57
VIM-AS1-201ENST00000437232 HOXD11P31277 338 aaPredicted RBP18.54■□□□□ 0.56
VIM-AS1-201ENST00000437232 DCAF8L1A6NGE4 600 aa18.49■□□□□ 0.55
VIM-AS1-201ENST00000437232 RNF216Q9NWF9 866 aaPredicted RBP18.43■□□□□ 0.54
VIM-AS1-201ENST00000437232 NCBP3Q53F19 620 aaKnown RBP18.3■□□□□ 0.52
VIM-AS1-201ENST00000437232 CACNB1Q02641 598 aaPredicted RBP18.08■□□□□ 0.49
VIM-AS1-201ENST00000437232 NPM3O75607 178 aaKnown RBP18.04■□□□□ 0.48
VIM-AS1-201ENST00000437232 RNF39Q9H2S5 420 aa18.01■□□□□ 0.47
VIM-AS1-201ENST00000437232 DNAJC5BQ9UF47 199 aa17.83■□□□□ 0.45
VIM-AS1-201ENST00000437232 KCNA4P22459 653 aa17.8■□□□□ 0.44
VIM-AS1-201ENST00000437232 C1QBPQ07021 282 aaKnown RBP17.74■□□□□ 0.43
VIM-AS1-201ENST00000437232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.71■□□□□ 0.43
VIM-AS1-201ENST00000437232 U3KPZ7 1027 aaPredicted RBP17.34■□□□□ 0.37
VIM-AS1-201ENST00000437232 SLC4A2P04920 1241 aa17.22■□□□□ 0.35
VIM-AS1-201ENST00000437232 SPINK5Q9NQ38 1064 aaPredicted RBP17.08■□□□□ 0.32
VIM-AS1-201ENST00000437232 CAPN15O75808 1086 aa17.04■□□□□ 0.32
VIM-AS1-201ENST00000437232 DSG3P32926 999 aa16.89■□□□□ 0.3
VIM-AS1-201ENST00000437232 SLC4A1APQ9BWU0 796 aaKnown RBP16.86■□□□□ 0.29
VIM-AS1-201ENST00000437232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.84■□□□□ 0.29
VIM-AS1-201ENST00000437232 HNRNPUL2Q1KMD3 747 aaKnown RBP16.84■□□□□ 0.29
VIM-AS1-201ENST00000437232 APLP2Q06481 763 aa16.82■□□□□ 0.28
VIM-AS1-201ENST00000437232 TRHP20396 242 aaPredicted RBP16.8■□□□□ 0.28
VIM-AS1-201ENST00000437232 SAMD1Q6SPF0 538 aaPredicted RBP16.76■□□□□ 0.27
VIM-AS1-201ENST00000437232 ZNF219Q9P2Y4 722 aaPredicted RBP16.73■□□□□ 0.27
VIM-AS1-201ENST00000437232 ABCB7O75027 752 aa16.68■□□□□ 0.26
VIM-AS1-201ENST00000437232 MYCNP04198 464 aaPredicted RBP16.68■□□□□ 0.26
VIM-AS1-201ENST00000437232 FOXD4L1Q9NU39 408 aa16.56■□□□□ 0.24
VIM-AS1-201ENST00000437232 ZBTB22O15209 634 aa16.37■□□□□ 0.21
VIM-AS1-201ENST00000437232 POLA2Q14181 598 aa16.36■□□□□ 0.21
VIM-AS1-201ENST00000437232 ATF5Q9Y2D1 282 aaPredicted RBP16.32■□□□□ 0.2
VIM-AS1-201ENST00000437232 RBM42Q9BTD8 480 aaKnown RBP16.11■□□□□ 0.17
VIM-AS1-201ENST00000437232 POTEHQ6S545 545 aa16.06■□□□□ 0.16
VIM-AS1-201ENST00000437232 ATXN8OSP0DMR3 200 aa16■□□□□ 0.15
VIM-AS1-201ENST00000437232 ZBTB12Q9Y330 459 aaPredicted RBP15.99■□□□□ 0.15
VIM-AS1-201ENST00000437232 OSCARQ8IYS5 282 aa15.84■□□□□ 0.13
VIM-AS1-201ENST00000437232 CSRNP3Q8WYN3 585 aa15.8■□□□□ 0.12
VIM-AS1-201ENST00000437232 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
VIM-AS1-201ENST00000437232 AKT1S1Q96B36 256 aa15.75■□□□□ 0.11
VIM-AS1-201ENST00000437232 CHRDL2Q6WN34 429 aa15.75■□□□□ 0.11
VIM-AS1-201ENST00000437232 FBLN2P98095 1184 aa15.65■□□□□ 0.1
VIM-AS1-201ENST00000437232 REM2Q8IYK8 340 aaPredicted RBP15.62■□□□□ 0.09
VIM-AS1-201ENST00000437232 MKRN4PQ13434 485 aaPredicted RBP15.57■□□□□ 0.08
VIM-AS1-201ENST00000437232 SPDYE2BA6NHP3 402 aa15.51■□□□□ 0.07
VIM-AS1-201ENST00000437232 SPDYE6P0CI01 402 aa15.51■□□□□ 0.07
VIM-AS1-201ENST00000437232 SPDYE2Q495Y8 402 aa15.51■□□□□ 0.07
VIM-AS1-201ENST00000437232 PITPNM1O00562 1244 aa15.48■□□□□ 0.07
VIM-AS1-201ENST00000437232 PIP4P2Q8N4L2 257 aa15.39■□□□□ 0.05
VIM-AS1-201ENST00000437232 ZNF692Q9BU19 519 aaPredicted RBP15.36■□□□□ 0.05
VIM-AS1-201ENST00000437232 SSUH2Q9Y2M2 353 aa15.32■□□□□ 0.04
VIM-AS1-201ENST00000437232 FXR2P51116 673 aaKnown RBP eCLIP15.29■□□□□ 0.04
VIM-AS1-201ENST00000437232 CLEC11AQ9Y240 323 aa15.24■□□□□ 0.03
VIM-AS1-201ENST00000437232 SPDYE1Q8NFV5 336 aaPredicted RBP15.24■□□□□ 0.03
VIM-AS1-201ENST00000437232 PABPN1Q86U42 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
VIM-AS1-201ENST00000437232 HAX1O00165 279 aa15.11■□□□□ 0.01
VIM-AS1-201ENST00000437232 SP7Q8TDD2 431 aaPredicted RBP15.09■□□□□ 0.01
VIM-AS1-201ENST00000437232 PRKAR2AP13861 404 aaKnown RBP15.08■□□□□ 0
VIM-AS1-201ENST00000437232 PRR29P0C7W0 189 aa14.98□□□□□ -0.01
VIM-AS1-201ENST00000437232 CHADLQ6NUI6 762 aa14.95□□□□□ -0.02
VIM-AS1-201ENST00000437232 EVX2Q03828 476 aa14.93□□□□□ -0.02
VIM-AS1-201ENST00000437232 SPDYE4A6NLX3 237 aa14.87□□□□□ -0.03
VIM-AS1-201ENST00000437232 C19orf67A6NJJ6 358 aa14.81□□□□□ -0.04
VIM-AS1-201ENST00000437232 STAG3Q9UJ98 1225 aa14.71□□□□□ -0.06
VIM-AS1-201ENST00000437232 FARP1Q9Y4F1 1045 aaPredicted RBP14.71□□□□□ -0.06
VIM-AS1-201ENST00000437232 CREBZFQ9NS37 354 aa14.62□□□□□ -0.07
VIM-AS1-201ENST00000437232 CD44P16070 742 aaKnown RBP14.6□□□□□ -0.07
VIM-AS1-201ENST00000437232 GABBR2O75899 941 aa14.58□□□□□ -0.08
VIM-AS1-201ENST00000437232 PROM2Q8N271 834 aa14.48□□□□□ -0.09
VIM-AS1-201ENST00000437232 ZRANB1Q9UGI0 708 aa14.42□□□□□ -0.1
VIM-AS1-201ENST00000437232 MNX1P50219 401 aaPredicted RBP14.36□□□□□ -0.11
VIM-AS1-201ENST00000437232 FKBP8Q14318 412 aa14.36□□□□□ -0.11
VIM-AS1-201ENST00000437232 ZNF579Q8NAF0 562 aaKnown RBP14.36□□□□□ -0.11
VIM-AS1-201ENST00000437232 NPM1P06748 294 aaKnown RBP eCLIP14.34□□□□□ -0.11
VIM-AS1-201ENST00000437232 CLCN6P51797 869 aa14.31□□□□□ -0.12
VIM-AS1-201ENST00000437232 PAK3O75914 559 aaPredicted RBP14.3□□□□□ -0.12
VIM-AS1-201ENST00000437232 POTEIP0CG38 1075 aa14.28□□□□□ -0.12
VIM-AS1-201ENST00000437232 PHF12Q96QT6 1004 aa14.24□□□□□ -0.13
VIM-AS1-201ENST00000437232 DCBLD2Q96PD2 775 aa14.22□□□□□ -0.13
VIM-AS1-201ENST00000437232 GALR2O43603 387 aaPredicted RBP14.21□□□□□ -0.14
VIM-AS1-201ENST00000437232 MIER1Q8N108 512 aa14.19□□□□□ -0.14
VIM-AS1-201ENST00000437232 PLEKHG5O94827 1062 aa14.17□□□□□ -0.14
VIM-AS1-201ENST00000437232 LHX8Q68G74 356 aa14.16□□□□□ -0.14
VIM-AS1-201ENST00000437232 TSPYL2Q9H2G4 693 aaPredicted RBP14.13□□□□□ -0.15
VIM-AS1-201ENST00000437232 PLCD3Q8N3E9 789 aa14.1□□□□□ -0.15
VIM-AS1-201ENST00000437232 MS4A3Q96HJ5 214 aa14.04□□□□□ -0.16
VIM-AS1-201ENST00000437232 CCDC61Q9Y6R9 512 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms