RNA–Protein interactions for RNA: ENST00000548199.1

AL133304.1-201, humanhuman

TSL 4 BASIC

Gene AL133304.1, Length 549 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL133304.1-201ENST00000548199 AEBP2Q6ZN18 517 aaPredicted RBP23.7■■□□□ 1.38
AL133304.1-201ENST00000548199 CHIC1Q5VXU3 224 aa22.2■■□□□ 1.14
AL133304.1-201ENST00000548199 SENP3Q9H4L4 574 aaPredicted RBP20.21■□□□□ 0.83
AL133304.1-201ENST00000548199 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
AL133304.1-201ENST00000548199 FOXD1Q16676 465 aa18.9■□□□□ 0.62
AL133304.1-201ENST00000548199 NISCHQ9Y2I1 1504 aa18.4■□□□□ 0.54
AL133304.1-201ENST00000548199 POTEDQ86YR6 584 aa17.84■□□□□ 0.45
AL133304.1-201ENST00000548199 MSH5O43196 834 aa17.77■□□□□ 0.44
AL133304.1-201ENST00000548199 PLPPR3Q6T4P5 718 aa17.59■□□□□ 0.41
AL133304.1-201ENST00000548199 PIAS4Q8N2W9 510 aaPredicted RBP17.58■□□□□ 0.4
AL133304.1-201ENST00000548199 PPP6R1Q9UPN7 881 aa17.46■□□□□ 0.39
AL133304.1-201ENST00000548199 ADRA2BP18089 450 aa17.38■□□□□ 0.37
AL133304.1-201ENST00000548199 CCDC180Q9P1Z9 1646 aa16.29■□□□□ 0.2
AL133304.1-201ENST00000548199 MAPK8IP2Q13387 824 aaPredicted RBP16.05■□□□□ 0.16
AL133304.1-201ENST00000548199 DMRT2Q9Y5R5 561 aa16■□□□□ 0.15
AL133304.1-201ENST00000548199 SCAF1Q9H7N4 1312 aaKnown RBP15.84■□□□□ 0.13
AL133304.1-201ENST00000548199 ABCC9O60706 1549 aa15.53■□□□□ 0.08
AL133304.1-201ENST00000548199 CACNB1Q02641 598 aaPredicted RBP15.4■□□□□ 0.06
AL133304.1-201ENST00000548199 PPP4R3CPQ6ZMV5 832 aa15.39■□□□□ 0.05
AL133304.1-201ENST00000548199 ZCCHC6Q5VYS8 1495 aaKnown RBP15.37■□□□□ 0.05
AL133304.1-201ENST00000548199 MYO15BQ96JP2 1530 aa15.35■□□□□ 0.05
AL133304.1-201ENST00000548199 DCAF1Q9Y4B6 1507 aa15.34■□□□□ 0.05
AL133304.1-201ENST00000548199 DCAF8L1A6NGE4 600 aa15.33■□□□□ 0.04
AL133304.1-201ENST00000548199 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
AL133304.1-201ENST00000548199 NACADO15069 1562 aa15.27■□□□□ 0.03
AL133304.1-201ENST00000548199 RB1CC1Q8TDY2 1594 aa15.18■□□□□ 0.02
AL133304.1-201ENST00000548199 RNF39Q9H2S5 420 aa15.16■□□□□ 0.02
AL133304.1-201ENST00000548199 CNKSR2Q8WXI2 1034 aa15.15■□□□□ 0.02
AL133304.1-201ENST00000548199 DCAF8L2P0C7V8 631 aa15.11■□□□□ 0.01
AL133304.1-201ENST00000548199 RNF216Q9NWF9 866 aaPredicted RBP15.1■□□□□ 0.01
AL133304.1-201ENST00000548199 C1QBPQ07021 282 aaKnown RBP14.89□□□□□ -0.03
AL133304.1-201ENST00000548199 UNC13AQ9UPW8 1703 aa14.82□□□□□ -0.04
AL133304.1-201ENST00000548199 DNAJC5BQ9UF47 199 aa14.81□□□□□ -0.04
AL133304.1-201ENST00000548199 SCRIBQ14160 1630 aa14.71□□□□□ -0.05
AL133304.1-201ENST00000548199 BICRAQ9NZM4 1560 aa14.69□□□□□ -0.06
AL133304.1-201ENST00000548199 SHROOM4Q9ULL8 1493 aa14.68□□□□□ -0.06
AL133304.1-201ENST00000548199 NCBP3Q53F19 620 aaKnown RBP14.67□□□□□ -0.06
AL133304.1-201ENST00000548199 PABPN1Q86U42 306 aaKnown RBP eCLIP14.55□□□□□ -0.08
AL133304.1-201ENST00000548199 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.55□□□□□ -0.08
AL133304.1-201ENST00000548199 NPM3O75607 178 aaKnown RBP14.53□□□□□ -0.08
AL133304.1-201ENST00000548199 EIF4G1Q04637 1599 aaKnown RBP14.27□□□□□ -0.12
AL133304.1-201ENST00000548199 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
AL133304.1-201ENST00000548199 BAZ1AQ9NRL2 1556 aaPredicted RBP14.25□□□□□ -0.13
AL133304.1-201ENST00000548199 CECR2Q9BXF3 1484 aa14.24□□□□□ -0.13
AL133304.1-201ENST00000548199 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
AL133304.1-201ENST00000548199 PEG3Q9GZU2 1588 aa14.15□□□□□ -0.14
AL133304.1-201ENST00000548199 CC2D2AQ9P2K1 1620 aa14.14□□□□□ -0.15
AL133304.1-201ENST00000548199 SPINK5Q9NQ38 1064 aaPredicted RBP14.13□□□□□ -0.15
AL133304.1-201ENST00000548199 MROH2BQ7Z745 1585 aa14.13□□□□□ -0.15
AL133304.1-201ENST00000548199 SMARCA2P51531 1590 aa14.09□□□□□ -0.15
AL133304.1-201ENST00000548199 RSF1Q96T23 1441 aaPredicted RBP14.09□□□□□ -0.15
AL133304.1-201ENST00000548199 CAPN15O75808 1086 aa14.09□□□□□ -0.15
AL133304.1-201ENST00000548199 DSG3P32926 999 aa14.09□□□□□ -0.15
AL133304.1-201ENST00000548199 NCAPD3P42695 1498 aa14.09□□□□□ -0.15
AL133304.1-201ENST00000548199 ATAD2BQ9ULI0 1458 aa14.07□□□□□ -0.16
AL133304.1-201ENST00000548199 HMGXB3Q12766 1538 aa14.02□□□□□ -0.16
AL133304.1-201ENST00000548199 KCNA4P22459 653 aa14□□□□□ -0.17
AL133304.1-201ENST00000548199 WIZO95785 1651 aa13.98□□□□□ -0.17
AL133304.1-201ENST00000548199 SLC4A2P04920 1241 aa13.96□□□□□ -0.17
AL133304.1-201ENST00000548199 BAZ1BQ9UIG0 1483 aaKnown RBP13.93□□□□□ -0.18
AL133304.1-201ENST00000548199 POTEHQ6S545 545 aa13.91□□□□□ -0.18
AL133304.1-201ENST00000548199 TOP2AP11388 1531 aaKnown RBP13.88□□□□□ -0.19
AL133304.1-201ENST00000548199 SUPT5HO00267 1087 aaKnown RBP13.79□□□□□ -0.2
AL133304.1-201ENST00000548199 TRHP20396 242 aaPredicted RBP13.79□□□□□ -0.2
AL133304.1-201ENST00000548199 ABCB7O75027 752 aa13.76□□□□□ -0.21
AL133304.1-201ENST00000548199 APLP2Q06481 763 aa13.76□□□□□ -0.21
AL133304.1-201ENST00000548199 ZNF219Q9P2Y4 722 aaPredicted RBP13.75□□□□□ -0.21
AL133304.1-201ENST00000548199 CCDC88BA6NC98 1476 aa13.71□□□□□ -0.21
AL133304.1-201ENST00000548199 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.69□□□□□ -0.22
AL133304.1-201ENST00000548199 HNRNPUL2Q1KMD3 747 aaKnown RBP13.69□□□□□ -0.22
AL133304.1-201ENST00000548199 CADPSQ9ULU8 1353 aa13.66□□□□□ -0.22
AL133304.1-201ENST00000548199 LAMC3Q9Y6N6 1575 aa13.65□□□□□ -0.22
AL133304.1-201ENST00000548199 CFTRP13569 1480 aa13.64□□□□□ -0.23
AL133304.1-201ENST00000548199 SAMD1Q6SPF0 538 aaPredicted RBP13.62□□□□□ -0.23
AL133304.1-201ENST00000548199 PRDM2Q13029 1718 aa13.56□□□□□ -0.24
AL133304.1-201ENST00000548199 PDS5BQ9NTI5 1447 aa13.55□□□□□ -0.24
AL133304.1-201ENST00000548199 NESP48681 1621 aa13.53□□□□□ -0.24
AL133304.1-201ENST00000548199 FANCD2Q9BXW9 1451 aa13.45□□□□□ -0.26
AL133304.1-201ENST00000548199 MYCNP04198 464 aaPredicted RBP13.42□□□□□ -0.26
AL133304.1-201ENST00000548199 RBM42Q9BTD8 480 aaKnown RBP13.42□□□□□ -0.26
AL133304.1-201ENST00000548199 KIF21AQ7Z4S6 1674 aa13.41□□□□□ -0.26
AL133304.1-201ENST00000548199 CEP164Q9UPV0 1460 aa13.4□□□□□ -0.26
AL133304.1-201ENST00000548199 ERCC6Q03468 1493 aa13.39□□□□□ -0.27
AL133304.1-201ENST00000548199 ABCC8Q09428 1581 aa13.38□□□□□ -0.27
AL133304.1-201ENST00000548199 POLA2Q14181 598 aa13.37□□□□□ -0.27
AL133304.1-201ENST00000548199 MRC2Q9UBG0 1479 aa13.35□□□□□ -0.27
AL133304.1-201ENST00000548199 THOC2Q8NI27 1593 aaKnown RBP13.32□□□□□ -0.28
AL133304.1-201ENST00000548199 WDR62O43379 1518 aa13.31□□□□□ -0.28
AL133304.1-201ENST00000548199 URB2Q14146 1524 aaKnown RBP13.29□□□□□ -0.28
AL133304.1-201ENST00000548199 DNMBPQ6XZF7 1577 aa13.28□□□□□ -0.28
AL133304.1-201ENST00000548199 CHRDL2Q6WN34 429 aa13.27□□□□□ -0.29
AL133304.1-201ENST00000548199 WRNQ14191 1432 aaPredicted RBP eCLIP13.27□□□□□ -0.29
AL133304.1-201ENST00000548199 CUX2O14529 1486 aa13.27□□□□□ -0.29
AL133304.1-201ENST00000548199 TOPBP1Q92547 1522 aa13.27□□□□□ -0.29
AL133304.1-201ENST00000548199 TOP2BQ02880 1626 aa13.24□□□□□ -0.29
AL133304.1-201ENST00000548199 BIVM-ERCC5R4GMW8 1640 aa13.24□□□□□ -0.29
AL133304.1-201ENST00000548199 CUX1P39880 1505 aa13.23□□□□□ -0.29
AL133304.1-201ENST00000548199 SYNJ1O43426 1573 aa13.18□□□□□ -0.3
AL133304.1-201ENST00000548199 ATF5Q9Y2D1 282 aaPredicted RBP13.17□□□□□ -0.3
AL133304.1-201ENST00000548199 POLA1P09884 1462 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms