RNA–Protein interactions for RNA: ENST00000355446.9

ERC1-202, Transcript of ELKS/RAB6-interacting/CAST family member 1, humanhuman

TSL 1 (best) BASIC

Gene ERC1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERC1-202ENST00000355446 DCAF8L2P0C7V8 631 aa14.77□□□□□ -0.04
ERC1-202ENST00000355446 NISCHQ9Y2I1 1504 aa14.46□□□□□ -0.1
ERC1-202ENST00000355446 SUPT5HO00267 1087 aaKnown RBP13.75□□□□□ -0.21
ERC1-202ENST00000355446 FAM9AQ8IZU1 332 aaPredicted RBP13.66□□□□□ -0.22
ERC1-202ENST00000355446 SHROOM4Q9ULL8 1493 aa13.56□□□□□ -0.24
ERC1-202ENST00000355446 APLP2Q06481 763 aa13.45□□□□□ -0.26
ERC1-202ENST00000355446 PELP1Q8IZL8 1130 aaKnown RBP13.17□□□□□ -0.3
ERC1-202ENST00000355446 EHMT2Q96KQ7 1210 aa13.11□□□□□ -0.31
ERC1-202ENST00000355446 TRIM41Q8WV44 630 aa12.94□□□□□ -0.34
ERC1-202ENST00000355446 ATP1B4Q9UN42 357 aaPredicted RBP12.85□□□□□ -0.35
ERC1-202ENST00000355446 UBTFP17480 764 aaKnown RBP12.8□□□□□ -0.36
ERC1-202ENST00000355446 ZEB1P37275 1124 aaPredicted RBP12.77□□□□□ -0.36
ERC1-202ENST00000355446 RANGAP1P46060 587 aaPredicted RBP12.76□□□□□ -0.37
ERC1-202ENST00000355446 TTBK1Q5TCY1 1321 aaPredicted RBP12.68□□□□□ -0.38
ERC1-202ENST00000355446 CCER1Q8TC90 406 aaPredicted RBP12.6□□□□□ -0.39
ERC1-202ENST00000355446 PCGF6Q9BYE7 350 aa12.59□□□□□ -0.39
ERC1-202ENST00000355446 MYT1LQ9UL68 1186 aa12.57□□□□□ -0.4
ERC1-202ENST00000355446 CENPBP07199 599 aaPredicted RBP12.54□□□□□ -0.4
ERC1-202ENST00000355446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.53□□□□□ -0.4
ERC1-202ENST00000355446 HNRNPUL2Q1KMD3 747 aaKnown RBP12.53□□□□□ -0.4
ERC1-202ENST00000355446 ABCC9O60706 1549 aa12.53□□□□□ -0.4
ERC1-202ENST00000355446 ERICH6Q7L0X2 663 aa12.42□□□□□ -0.42
ERC1-202ENST00000355446 NEFLP07196 543 aa12.41□□□□□ -0.42
ERC1-202ENST00000355446 PABPN1Q86U42 306 aaKnown RBP eCLIP12.32□□□□□ -0.44
ERC1-202ENST00000355446 TRIM26Q12899 539 aaPredicted RBP12.29□□□□□ -0.44
ERC1-202ENST00000355446 ITGAEP38570 1179 aa12.21□□□□□ -0.45
ERC1-202ENST00000355446 CCDC180Q9P1Z9 1646 aa12.17□□□□□ -0.46
ERC1-202ENST00000355446 POLR3GLQ9BT43 218 aa12.14□□□□□ -0.47
ERC1-202ENST00000355446 CHIC1Q5VXU3 224 aa12.13□□□□□ -0.47
ERC1-202ENST00000355446 PPARGC1BQ86YN6 1023 aaKnown RBP12.1□□□□□ -0.47
ERC1-202ENST00000355446 FBLN2P98095 1184 aa12.1□□□□□ -0.47
ERC1-202ENST00000355446 SLC4A1APQ9BWU0 796 aaKnown RBP12.1□□□□□ -0.47
ERC1-202ENST00000355446 FAM50AQ14320 339 aaKnown RBP12.08□□□□□ -0.48
ERC1-202ENST00000355446 DAXXQ9UER7 740 aaPredicted RBP12.08□□□□□ -0.48
ERC1-202ENST00000355446 TRIM52Q96A61 297 aa12.05□□□□□ -0.48
ERC1-202ENST00000355446 CDK11AQ9UQ88 783 aaPredicted RBP12.03□□□□□ -0.48
ERC1-202ENST00000355446 SCRIBQ14160 1630 aa12.03□□□□□ -0.48
ERC1-202ENST00000355446 YTHDC1Q96MU7 727 aaKnown RBP12.02□□□□□ -0.49
ERC1-202ENST00000355446 RB1CC1Q8TDY2 1594 aa12.01□□□□□ -0.49
ERC1-202ENST00000355446 NPM1P06748 294 aaKnown RBP eCLIP11.96□□□□□ -0.49
ERC1-202ENST00000355446 LOC105371045A0A1W2PR82 267 aa11.95□□□□□ -0.5
ERC1-202ENST00000355446 ZCCHC6Q5VYS8 1495 aaKnown RBP11.95□□□□□ -0.5
ERC1-202ENST00000355446 ESF1Q9H501 851 aaKnown RBP11.95□□□□□ -0.5
ERC1-202ENST00000355446 BCANQ96GW7 911 aa11.88□□□□□ -0.51
ERC1-202ENST00000355446 NEFMP07197 916 aa11.88□□□□□ -0.51
ERC1-202ENST00000355446 CSRNP3Q8WYN3 585 aa11.87□□□□□ -0.51
ERC1-202ENST00000355446 HRCP23327 699 aa11.86□□□□□ -0.51
ERC1-202ENST00000355446 NACADO15069 1562 aa11.85□□□□□ -0.51
ERC1-202ENST00000355446 MYT1Q01538 1121 aa11.84□□□□□ -0.51
ERC1-202ENST00000355446 ZBTB47Q9UFB7 747 aaPredicted RBP11.84□□□□□ -0.51
ERC1-202ENST00000355446 CLSPNQ9HAW4 1339 aa11.8□□□□□ -0.52
ERC1-202ENST00000355446 NEUROD1Q13562 356 aa11.8□□□□□ -0.52
ERC1-202ENST00000355446 CNGB1Q14028 1251 aaPredicted RBP11.79□□□□□ -0.52
ERC1-202ENST00000355446 ZNF326Q5BKZ1 582 aaKnown RBP11.78□□□□□ -0.52
ERC1-202ENST00000355446 ZNF777Q9ULD5 760 aaPredicted RBP11.77□□□□□ -0.52
ERC1-202ENST00000355446 ANP32CO43423 234 aa11.77□□□□□ -0.53
ERC1-202ENST00000355446 STAG3Q9UJ98 1225 aa11.77□□□□□ -0.53
ERC1-202ENST00000355446 ZNF316A6NFI3 1004 aaPredicted RBP11.76□□□□□ -0.53
ERC1-202ENST00000355446 P3H3Q8IVL6 736 aa11.75□□□□□ -0.53
ERC1-202ENST00000355446 ACIN1Q9UKV3 1341 aaKnown RBP11.74□□□□□ -0.53
ERC1-202ENST00000355446 CHMP7Q8WUX9 453 aaPredicted RBP11.72□□□□□ -0.53
ERC1-202ENST00000355446 DIEXFQ68CQ4 756 aaKnown RBP11.69□□□□□ -0.54
ERC1-202ENST00000355446 ARID3CA6NKF2 412 aa11.68□□□□□ -0.54
ERC1-202ENST00000355446 CANXP27824 592 aaKnown RBP11.67□□□□□ -0.54
ERC1-202ENST00000355446 SLC24A1O60721 1099 aa11.66□□□□□ -0.54
ERC1-202ENST00000355446 BAZ1BQ9UIG0 1483 aaKnown RBP11.65□□□□□ -0.55
ERC1-202ENST00000355446 EEA1Q15075 1411 aa11.63□□□□□ -0.55
ERC1-202ENST00000355446 TSPY4P0CV99 314 aa11.63□□□□□ -0.55
ERC1-202ENST00000355446 TSPY10P0CW01 314 aa11.63□□□□□ -0.55
ERC1-202ENST00000355446 CHGAP10645 457 aaKnown RBP11.62□□□□□ -0.55
ERC1-202ENST00000355446 RTL5Q5HYW3 569 aaPredicted RBP11.61□□□□□ -0.55
ERC1-202ENST00000355446 RSF1Q96T23 1441 aaPredicted RBP11.61□□□□□ -0.55
ERC1-202ENST00000355446 ERCC6Q03468 1493 aa11.61□□□□□ -0.55
ERC1-202ENST00000355446 TONSLQ96HA7 1378 aa11.6□□□□□ -0.55
ERC1-202ENST00000355446 MTUS2Q5JR59 1369 aa11.58□□□□□ -0.56
ERC1-202ENST00000355446 DCAF1Q9Y4B6 1507 aa11.54□□□□□ -0.56
ERC1-202ENST00000355446 PLEKHD1A6NEE1 506 aa11.53□□□□□ -0.56
ERC1-202ENST00000355446 BAZ1AQ9NRL2 1556 aaPredicted RBP11.52□□□□□ -0.56
ERC1-202ENST00000355446 KIF27Q86VH2 1401 aa11.5□□□□□ -0.57
ERC1-202ENST00000355446 GOLGA3Q08378 1498 aa11.5□□□□□ -0.57
ERC1-202ENST00000355446 PLPPR3Q6T4P5 718 aa11.49□□□□□ -0.57
ERC1-202ENST00000355446 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.49□□□□□ -0.571e-6■■■□□ 17.5
ERC1-202ENST00000355446 CLIP1P30622 1438 aa11.47□□□□□ -0.57
ERC1-202ENST00000355446 WRNQ14191 1432 aaPredicted RBP eCLIP11.46□□□□□ -0.57
ERC1-202ENST00000355446 PPP1R15AO75807 674 aaPredicted RBP11.46□□□□□ -0.57
ERC1-202ENST00000355446 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.42□□□□□ -0.58
ERC1-202ENST00000355446 CHIC2Q9UKJ5 165 aa11.41□□□□□ -0.58
ERC1-202ENST00000355446 CEP164Q9UPV0 1460 aa11.41□□□□□ -0.58
ERC1-202ENST00000355446 SMARCA2P51531 1590 aa11.4□□□□□ -0.58
ERC1-202ENST00000355446 ARID4BQ4LE39 1312 aaPredicted RBP11.4□□□□□ -0.58
ERC1-202ENST00000355446 KCNH8Q96L42 1107 aa11.4□□□□□ -0.59
ERC1-202ENST00000355446 WDR43Q15061 677 aaKnown RBP eCLIP11.39□□□□□ -0.59
ERC1-202ENST00000355446 CDCA8Q53HL2 280 aa11.39□□□□□ -0.59
ERC1-202ENST00000355446 NPM2Q86SE8 214 aaKnown RBP11.39□□□□□ -0.59
ERC1-202ENST00000355446 PDS5BQ9NTI5 1447 aa11.37□□□□□ -0.59
ERC1-202ENST00000355446 C14orf37Q86TY3 774 aa11.37□□□□□ -0.59
ERC1-202ENST00000355446 SCAF1Q9H7N4 1312 aaKnown RBP11.36□□□□□ -0.59
ERC1-202ENST00000355446 UPF2Q9HAU5 1272 aaKnown RBP11.36□□□□□ -0.59
ERC1-202ENST00000355446 CFDP1Q9UEE9 299 aaPredicted RBP11.35□□□□□ -0.59
ERC1-202ENST00000355446 HDGFP51858 240 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms