Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC092960.1-201ENST00000604762 351 ntBASIC6.55□□□□□ -1.36
NPIPA3F8WFD2 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.55□□□□□ -1.36
NPIPA3F8WFD2 CACNB2-214ENST00000612743 597 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NPIPA3F8WFD2 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.55□□□□□ -1.36
NPIPA3F8WFD2 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
NPIPA3F8WFD2 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
NPIPA3F8WFD2 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NPIPA3F8WFD2 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NPIPA3F8WFD2 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NPIPA3F8WFD2 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NPIPA3F8WFD2 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NPIPA3F8WFD2 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
NPIPA3F8WFD2 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC6.55□□□□□ -1.36
NPIPA3F8WFD2 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 AL512353.3-201ENST00000417517 1326 ntBASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 AC010329.1-201ENST00000593903 8328 ntBASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 GEMIN2P2-201ENST00000418195 715 ntBASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 AL593856.1-201ENST00000419949 805 ntBASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 AC073900.1-201ENST00000429766 776 ntBASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 AC009244.1-201ENST00000450566 258 ntBASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 AC022730.1-201ENST00000473114 568 ntBASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 RBMS2P1-201ENST00000525031 1226 ntBASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 AC130366.1-201ENST00000526505 1192 ntBASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 NDUFA3P4-201ENST00000560814 250 ntBASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 AC027348.2-201ENST00000624375 642 ntBASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.54□□□□□ -1.36
NPIPA3F8WFD2 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 E2F6P1-201ENST00000428850 745 ntBASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 AC027124.1-201ENST00000440852 466 ntBASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 RPL21P33-201ENST00000444831 484 ntBASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 WBP1LP1-201ENST00000460451 896 ntBASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 RN7SL518P-201ENST00000491887 280 ntBASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 RNA5SP518-201ENST00000515957 119 ntBASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 IGLV1-62-201ENST00000518003 441 ntBASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 RPL10P18-201ENST00000519384 309 ntBASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.53□□□□□ -1.36
NPIPA3F8WFD2 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms