RNA–Protein interactions for RNA: ENST00000519306.1

AC027541.1-201, humanhuman

TSL 3 BASIC

Gene AC027541.1, Length 485 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027541.1-201ENST00000519306 AEBP2Q6ZN18 517 aaPredicted RBP23.66■■□□□ 1.38
AC027541.1-201ENST00000519306 CHIC1Q5VXU3 224 aa21.95■■□□□ 1.1
AC027541.1-201ENST00000519306 SENP3Q9H4L4 574 aaPredicted RBP20.19■□□□□ 0.82
AC027541.1-201ENST00000519306 PHF23Q9BUL5 403 aaPredicted RBP19.89■□□□□ 0.77
AC027541.1-201ENST00000519306 POTEDQ86YR6 584 aa19.17■□□□□ 0.66
AC027541.1-201ENST00000519306 FOXD1Q16676 465 aa19.02■□□□□ 0.64
AC027541.1-201ENST00000519306 MSH5O43196 834 aa18.02■□□□□ 0.48
AC027541.1-201ENST00000519306 PIAS4Q8N2W9 510 aaPredicted RBP17.49■□□□□ 0.39
AC027541.1-201ENST00000519306 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
AC027541.1-201ENST00000519306 ADRA2BP18089 450 aa17.04■□□□□ 0.32
AC027541.1-201ENST00000519306 NISCHQ9Y2I1 1504 aa16.93■□□□□ 0.3
AC027541.1-201ENST00000519306 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
AC027541.1-201ENST00000519306 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
AC027541.1-201ENST00000519306 MAPK8IP2Q13387 824 aaPredicted RBP15.94■□□□□ 0.14
AC027541.1-201ENST00000519306 DMRT2Q9Y5R5 561 aa15.91■□□□□ 0.14
AC027541.1-201ENST00000519306 SCAF1Q9H7N4 1312 aaKnown RBP15.45■□□□□ 0.06
AC027541.1-201ENST00000519306 RNF39Q9H2S5 420 aa15.36■□□□□ 0.05
AC027541.1-201ENST00000519306 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
AC027541.1-201ENST00000519306 CCDC180Q9P1Z9 1646 aa15.06■□□□□ 0
AC027541.1-201ENST00000519306 C1QBPQ07021 282 aaKnown RBP15.04■□□□□ -0
AC027541.1-201ENST00000519306 HOXD11P31277 338 aaPredicted RBP14.99□□□□□ -0.01
AC027541.1-201ENST00000519306 POTEHQ6S545 545 aa14.82□□□□□ -0.04
AC027541.1-201ENST00000519306 ABCC9O60706 1549 aa14.8□□□□□ -0.04
AC027541.1-201ENST00000519306 PPP4R3CPQ6ZMV5 832 aa14.64□□□□□ -0.07
AC027541.1-201ENST00000519306 RNF216Q9NWF9 866 aaPredicted RBP14.62□□□□□ -0.07
AC027541.1-201ENST00000519306 DNAJC5BQ9UF47 199 aa14.59□□□□□ -0.07
AC027541.1-201ENST00000519306 CNKSR2Q8WXI2 1034 aa14.53□□□□□ -0.08
AC027541.1-201ENST00000519306 DCAF8L2P0C7V8 631 aa14.29□□□□□ -0.12
AC027541.1-201ENST00000519306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.25□□□□□ -0.13
AC027541.1-201ENST00000519306 RB1CC1Q8TDY2 1594 aa14.25□□□□□ -0.13
AC027541.1-201ENST00000519306 NACADO15069 1562 aa14.21□□□□□ -0.14
AC027541.1-201ENST00000519306 MYO15BQ96JP2 1530 aa14.1□□□□□ -0.15
AC027541.1-201ENST00000519306 DSG3P32926 999 aa14.1□□□□□ -0.15
AC027541.1-201ENST00000519306 ZCCHC6Q5VYS8 1495 aaKnown RBP14.06□□□□□ -0.16
AC027541.1-201ENST00000519306 DCAF1Q9Y4B6 1507 aa14.02□□□□□ -0.16
AC027541.1-201ENST00000519306 SPINK5Q9NQ38 1064 aaPredicted RBP13.99□□□□□ -0.17
AC027541.1-201ENST00000519306 CAPN15O75808 1086 aa13.94□□□□□ -0.18
AC027541.1-201ENST00000519306 U3KPZ7 1027 aaPredicted RBP13.9□□□□□ -0.18
AC027541.1-201ENST00000519306 PABPN1Q86U42 306 aaKnown RBP eCLIP13.85□□□□□ -0.19
AC027541.1-201ENST00000519306 UNC13AQ9UPW8 1703 aa13.81□□□□□ -0.2
AC027541.1-201ENST00000519306 NCBP3Q53F19 620 aaKnown RBP13.73□□□□□ -0.21
AC027541.1-201ENST00000519306 SCRIBQ14160 1630 aa13.72□□□□□ -0.21
AC027541.1-201ENST00000519306 BICRAQ9NZM4 1560 aa13.71□□□□□ -0.21
AC027541.1-201ENST00000519306 SHROOM4Q9ULL8 1493 aa13.67□□□□□ -0.22
AC027541.1-201ENST00000519306 NPM3O75607 178 aaKnown RBP13.62□□□□□ -0.23
AC027541.1-201ENST00000519306 ABCB7O75027 752 aa13.57□□□□□ -0.24
AC027541.1-201ENST00000519306 TRHP20396 242 aaPredicted RBP13.52□□□□□ -0.25
AC027541.1-201ENST00000519306 CHRDL2Q6WN34 429 aa13.5□□□□□ -0.25
AC027541.1-201ENST00000519306 SP7Q8TDD2 431 aaPredicted RBP13.46□□□□□ -0.25
AC027541.1-201ENST00000519306 EIF4G1Q04637 1599 aaKnown RBP13.41□□□□□ -0.26
AC027541.1-201ENST00000519306 ZNF219Q9P2Y4 722 aaPredicted RBP13.4□□□□□ -0.26
AC027541.1-201ENST00000519306 RBM42Q9BTD8 480 aaKnown RBP13.37□□□□□ -0.27
AC027541.1-201ENST00000519306 CC2D2AQ9P2K1 1620 aa13.36□□□□□ -0.27
AC027541.1-201ENST00000519306 CECR2Q9BXF3 1484 aa13.32□□□□□ -0.28
AC027541.1-201ENST00000519306 SLC4A2P04920 1241 aa13.28□□□□□ -0.28
AC027541.1-201ENST00000519306 APLP2Q06481 763 aa13.27□□□□□ -0.29
AC027541.1-201ENST00000519306 BAZ1AQ9NRL2 1556 aaPredicted RBP13.15□□□□□ -0.3
AC027541.1-201ENST00000519306 SMARCA4P51532 1647 aa13.13□□□□□ -0.31
AC027541.1-201ENST00000519306 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
AC027541.1-201ENST00000519306 NCAPD3P42695 1498 aa13.1□□□□□ -0.31
AC027541.1-201ENST00000519306 ATAD2BQ9ULI0 1458 aa13.09□□□□□ -0.31
AC027541.1-201ENST00000519306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.07□□□□□ -0.32
AC027541.1-201ENST00000519306 KCNA4P22459 653 aa13.07□□□□□ -0.32
AC027541.1-201ENST00000519306 HNRNPUL2Q1KMD3 747 aaKnown RBP13.07□□□□□ -0.32
AC027541.1-201ENST00000519306 HMGXB3Q12766 1538 aa13.03□□□□□ -0.32
AC027541.1-201ENST00000519306 MROH2BQ7Z745 1585 aa13.02□□□□□ -0.33
AC027541.1-201ENST00000519306 PIP4P2Q8N4L2 257 aa13.01□□□□□ -0.33
AC027541.1-201ENST00000519306 BAZ1BQ9UIG0 1483 aaKnown RBP13.01□□□□□ -0.33
AC027541.1-201ENST00000519306 HAX1O00165 279 aa13□□□□□ -0.33
AC027541.1-201ENST00000519306 PEG3Q9GZU2 1588 aa12.99□□□□□ -0.33
AC027541.1-201ENST00000519306 SAMD1Q6SPF0 538 aaPredicted RBP12.99□□□□□ -0.33
AC027541.1-201ENST00000519306 POLA2Q14181 598 aa12.98□□□□□ -0.33
AC027541.1-201ENST00000519306 AKT1S1Q96B36 256 aa12.94□□□□□ -0.34
AC027541.1-201ENST00000519306 RSF1Q96T23 1441 aaPredicted RBP12.88□□□□□ -0.35
AC027541.1-201ENST00000519306 EVX2Q03828 476 aa12.88□□□□□ -0.35
AC027541.1-201ENST00000519306 WIZO95785 1651 aa12.86□□□□□ -0.35
AC027541.1-201ENST00000519306 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
AC027541.1-201ENST00000519306 ERCC6Q03468 1493 aa12.82□□□□□ -0.36
AC027541.1-201ENST00000519306 FXR2P51116 673 aaKnown RBP eCLIP12.8□□□□□ -0.36
AC027541.1-201ENST00000519306 LAMC3Q9Y6N6 1575 aa12.77□□□□□ -0.36
AC027541.1-201ENST00000519306 TOP2AP11388 1531 aaKnown RBP12.76□□□□□ -0.37
AC027541.1-201ENST00000519306 NESP48681 1621 aa12.76□□□□□ -0.37
AC027541.1-201ENST00000519306 CADPSQ9ULU8 1353 aa12.75□□□□□ -0.37
AC027541.1-201ENST00000519306 PDS5BQ9NTI5 1447 aa12.74□□□□□ -0.37
AC027541.1-201ENST00000519306 PITPNM1O00562 1244 aa12.72□□□□□ -0.37
AC027541.1-201ENST00000519306 CUX2O14529 1486 aa12.67□□□□□ -0.38
AC027541.1-201ENST00000519306 SUPT5HO00267 1087 aaKnown RBP12.67□□□□□ -0.38
AC027541.1-201ENST00000519306 LHX8Q68G74 356 aa12.64□□□□□ -0.39
AC027541.1-201ENST00000519306 CFTRP13569 1480 aa12.63□□□□□ -0.39
AC027541.1-201ENST00000519306 CCDC88BA6NC98 1476 aa12.61□□□□□ -0.39
AC027541.1-201ENST00000519306 KIF21AQ7Z4S6 1674 aa12.59□□□□□ -0.39
AC027541.1-201ENST00000519306 FANCD2Q9BXW9 1451 aa12.59□□□□□ -0.39
AC027541.1-201ENST00000519306 CEP164Q9UPV0 1460 aa12.58□□□□□ -0.4
AC027541.1-201ENST00000519306 OSCARQ8IYS5 282 aa12.57□□□□□ -0.4
AC027541.1-201ENST00000519306 MRC2Q9UBG0 1479 aa12.56□□□□□ -0.4
AC027541.1-201ENST00000519306 MYCNP04198 464 aaPredicted RBP12.55□□□□□ -0.4
AC027541.1-201ENST00000519306 PLSCR2Q9NRY7 297 aa12.55□□□□□ -0.4
AC027541.1-201ENST00000519306 THOC2Q8NI27 1593 aaKnown RBP12.55□□□□□ -0.4
AC027541.1-201ENST00000519306 ZBTB12Q9Y330 459 aaPredicted RBP12.52□□□□□ -0.41
AC027541.1-201ENST00000519306 PRDM2Q13029 1718 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms