Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 MKRN4P-201ENST00000444706 1521 ntBASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 AC084018.2-201ENST00000613093 2607 ntBASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPCS1Q9Y6A9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SPCS1Q9Y6A9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.71□□□□□ -0.21
SPCS1Q9Y6A9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS1Q9Y6A9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.71□□□□□ -0.21
SPCS1Q9Y6A9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS1Q9Y6A9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS1Q9Y6A9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SPCS1Q9Y6A9 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS1Q9Y6A9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
SPCS1Q9Y6A9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.71□□□□□ -0.21
SPCS1Q9Y6A9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.71□□□□□ -0.21
SPCS1Q9Y6A9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS1Q9Y6A9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS1Q9Y6A9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.71□□□□□ -0.21
SPCS1Q9Y6A9 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS1Q9Y6A9 MIR762-201ENST00000390236 83 ntBASIC13.71□□□□□ -0.21
SPCS1Q9Y6A9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.71□□□□□ -0.21
SPCS1Q9Y6A9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SPCS1Q9Y6A9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SPCS1Q9Y6A9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.71□□□□□ -0.21
SPCS1Q9Y6A9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC13.71□□□□□ -0.22
SPCS1Q9Y6A9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SPCS1Q9Y6A9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SPCS1Q9Y6A9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SPCS1Q9Y6A9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS1Q9Y6A9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS1Q9Y6A9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS1Q9Y6A9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPCS1Q9Y6A9 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SPCS1Q9Y6A9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms