Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGA4Q9Y5G9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.64■□□□□ 0.74
PCDHGA4Q9Y5G9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGA4Q9Y5G9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA4Q9Y5G9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA4Q9Y5G9 UBE2SP1-201ENST00000450587 669 ntBASIC19.64■□□□□ 0.73
PCDHGA4Q9Y5G9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHGA4Q9Y5G9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
PCDHGA4Q9Y5G9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA4Q9Y5G9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHGA4Q9Y5G9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHGA4Q9Y5G9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHGA4Q9Y5G9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA4Q9Y5G9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHGA4Q9Y5G9 AC027702.1-201ENST00000563810 1770 ntBASIC19.64■□□□□ 0.73
PCDHGA4Q9Y5G9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA4Q9Y5G9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHGA4Q9Y5G9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHGA4Q9Y5G9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHGA4Q9Y5G9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA4Q9Y5G9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHGA4Q9Y5G9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PCDHGA4Q9Y5G9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 AC100791.3-201ENST00000617619 330 ntBASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA4Q9Y5G9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 AL359736.2-201ENST00000621992 437 ntBASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGA4Q9Y5G9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA4Q9Y5G9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 CYP21A1P-202ENST00000354927 1481 ntBASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGA4Q9Y5G9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms