Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRCH1Q9Y2L9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRCH1Q9Y2L9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRCH1Q9Y2L9 NOC2LP2-201ENST00000407594 1944 ntBASIC18.96■□□□□ 0.63
LRCH1Q9Y2L9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.96■□□□□ 0.63
LRCH1Q9Y2L9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
LRCH1Q9Y2L9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRCH1Q9Y2L9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.95■□□□□ 0.62
LRCH1Q9Y2L9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LRCH1Q9Y2L9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRCH1Q9Y2L9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LRCH1Q9Y2L9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.95■□□□□ 0.62
LRCH1Q9Y2L9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRCH1Q9Y2L9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LRCH1Q9Y2L9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.95■□□□□ 0.62
LRCH1Q9Y2L9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRCH1Q9Y2L9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRCH1Q9Y2L9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LRCH1Q9Y2L9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
LRCH1Q9Y2L9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRCH1Q9Y2L9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 AC068587.7-201ENST00000641602 218 ntBASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH1Q9Y2L9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRCH1Q9Y2L9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRCH1Q9Y2L9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
LRCH1Q9Y2L9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
LRCH1Q9Y2L9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRCH1Q9Y2L9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LRCH1Q9Y2L9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.93■□□□□ 0.62
LRCH1Q9Y2L9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LRCH1Q9Y2L9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LRCH1Q9Y2L9 SRD5A1P1-201ENST00000442297 786 ntBASIC18.93■□□□□ 0.62
LRCH1Q9Y2L9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRCH1Q9Y2L9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
LRCH1Q9Y2L9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
LRCH1Q9Y2L9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRCH1Q9Y2L9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.93■□□□□ 0.62
LRCH1Q9Y2L9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.92■□□□□ 0.62
LRCH1Q9Y2L9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRCH1Q9Y2L9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms