Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATP6V0A4Q9HBG4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATP6V0A4Q9HBG4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATP6V0A4Q9HBG4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATP6V0A4Q9HBG4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
ATP6V0A4Q9HBG4 KRT8P17-201ENST00000453110 1448 ntBASIC22.22■■□□□ 1.15
ATP6V0A4Q9HBG4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATP6V0A4Q9HBG4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATP6V0A4Q9HBG4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
ATP6V0A4Q9HBG4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V0A4Q9HBG4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V0A4Q9HBG4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V0A4Q9HBG4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V0A4Q9HBG4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V0A4Q9HBG4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.2■■□□□ 1.14
ATP6V0A4Q9HBG4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.2■■□□□ 1.14
ATP6V0A4Q9HBG4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V0A4Q9HBG4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.2■■□□□ 1.14
ATP6V0A4Q9HBG4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.2■■□□□ 1.14
ATP6V0A4Q9HBG4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.2■■□□□ 1.14
ATP6V0A4Q9HBG4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V0A4Q9HBG4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.2■■□□□ 1.14
ATP6V0A4Q9HBG4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
ATP6V0A4Q9HBG4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
ATP6V0A4Q9HBG4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V0A4Q9HBG4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.2■■□□□ 1.14
ATP6V0A4Q9HBG4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
ATP6V0A4Q9HBG4 AC020907.5-201ENST00000624372 1936 ntBASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 AC073314.1-201ENST00000568729 2216 ntBASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V0A4Q9HBG4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V0A4Q9HBG4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V0A4Q9HBG4 SMG8-203ENST00000578922 2178 ntBASIC22.18■■□□□ 1.14
ATP6V0A4Q9HBG4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
ATP6V0A4Q9HBG4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
ATP6V0A4Q9HBG4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V0A4Q9HBG4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V0A4Q9HBG4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.18■■□□□ 1.14
ATP6V0A4Q9HBG4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.18■■□□□ 1.14
ATP6V0A4Q9HBG4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.18■■□□□ 1.14
ATP6V0A4Q9HBG4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
ATP6V0A4Q9HBG4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V0A4Q9HBG4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V0A4Q9HBG4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.17■■□□□ 1.14
ATP6V0A4Q9HBG4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms