Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLPBQ9H078 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLPBQ9H078 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLPBQ9H078 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLPBQ9H078 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLPBQ9H078 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLPBQ9H078 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.06■□□□□ 0.8
CLPBQ9H078 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
CLPBQ9H078 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLPBQ9H078 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.06■□□□□ 0.8
CLPBQ9H078 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.06■□□□□ 0.8
CLPBQ9H078 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLPBQ9H078 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CLPBQ9H078 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLPBQ9H078 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLPBQ9H078 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLPBQ9H078 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.06■□□□□ 0.8
CLPBQ9H078 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.06■□□□□ 0.8
CLPBQ9H078 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLPBQ9H078 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLPBQ9H078 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CLPBQ9H078 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.06■□□□□ 0.8
CLPBQ9H078 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.06■□□□□ 0.8
CLPBQ9H078 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CLPBQ9H078 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPBQ9H078 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPBQ9H078 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPBQ9H078 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.05■□□□□ 0.8
CLPBQ9H078 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPBQ9H078 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPBQ9H078 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.05■□□□□ 0.8
CLPBQ9H078 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLPBQ9H078 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLPBQ9H078 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CLPBQ9H078 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLPBQ9H078 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.05■□□□□ 0.8
CLPBQ9H078 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.05■□□□□ 0.8
CLPBQ9H078 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPBQ9H078 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPBQ9H078 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPBQ9H078 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CLPBQ9H078 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPBQ9H078 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CLPBQ9H078 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.05■□□□□ 0.8
CLPBQ9H078 AL512408.1-201ENST00000569378 2000 ntBASIC20.05■□□□□ 0.8
CLPBQ9H078 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPBQ9H078 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLPBQ9H078 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLPBQ9H078 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CLPBQ9H078 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLPBQ9H078 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.04■□□□□ 0.8
CLPBQ9H078 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLPBQ9H078 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPBQ9H078 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPBQ9H078 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLPBQ9H078 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPBQ9H078 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPBQ9H078 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLPBQ9H078 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPBQ9H078 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPBQ9H078 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.04■□□□□ 0.8
CLPBQ9H078 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.04■□□□□ 0.8
CLPBQ9H078 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.04■□□□□ 0.8
CLPBQ9H078 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.04■□□□□ 0.8
CLPBQ9H078 C2orf69P4-201ENST00000565394 541 ntBASIC20.04■□□□□ 0.8
CLPBQ9H078 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.04■□□□□ 0.8
CLPBQ9H078 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPBQ9H078 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CLPBQ9H078 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPBQ9H078 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPBQ9H078 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPBQ9H078 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPBQ9H078 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLPBQ9H078 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.04■□□□□ 0.8
CLPBQ9H078 DPP3P2-201ENST00000416030 1696 ntBASIC20.03■□□□□ 0.8
CLPBQ9H078 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.03■□□□□ 0.8
CLPBQ9H078 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPBQ9H078 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLPBQ9H078 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLPBQ9H078 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPBQ9H078 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPBQ9H078 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPBQ9H078 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPBQ9H078 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPBQ9H078 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.03■□□□□ 0.8
CLPBQ9H078 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPBQ9H078 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPBQ9H078 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPBQ9H078 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPBQ9H078 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.03■□□□□ 0.8
CLPBQ9H078 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLPBQ9H078 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.03■□□□□ 0.8
CLPBQ9H078 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.03■□□□□ 0.8
CLPBQ9H078 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.03■□□□□ 0.8
CLPBQ9H078 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPBQ9H078 SOX15-203ENST00000570788 1093 ntBASIC20.03■□□□□ 0.8
CLPBQ9H078 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPBQ9H078 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPBQ9H078 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLPBQ9H078 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms