Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PKP2Q99959 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PKP2Q99959 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PKP2Q99959 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.78■□□□□ 0.6
PKP2Q99959 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.78■□□□□ 0.6
PKP2Q99959 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.78■□□□□ 0.6
PKP2Q99959 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PKP2Q99959 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PKP2Q99959 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PKP2Q99959 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.78■□□□□ 0.6
PKP2Q99959 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PKP2Q99959 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.78■□□□□ 0.6
PKP2Q99959 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PKP2Q99959 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PKP2Q99959 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PKP2Q99959 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PKP2Q99959 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PKP2Q99959 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PKP2Q99959 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
PKP2Q99959 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PKP2Q99959 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.77■□□□□ 0.6
PKP2Q99959 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PKP2Q99959 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.77■□□□□ 0.6
PKP2Q99959 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
PKP2Q99959 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PKP2Q99959 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PKP2Q99959 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PKP2Q99959 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PKP2Q99959 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.77■□□□□ 0.6
PKP2Q99959 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PKP2Q99959 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.77■□□□□ 0.6
PKP2Q99959 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PKP2Q99959 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.77■□□□□ 0.6
PKP2Q99959 MIR4466-201ENST00000606121 54 ntBASIC18.77■□□□□ 0.6
PKP2Q99959 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PKP2Q99959 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
PKP2Q99959 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PKP2Q99959 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
PKP2Q99959 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PKP2Q99959 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
PKP2Q99959 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PKP2Q99959 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.76■□□□□ 0.59
PKP2Q99959 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PKP2Q99959 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.76■□□□□ 0.59
PKP2Q99959 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PKP2Q99959 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PKP2Q99959 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PKP2Q99959 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PKP2Q99959 AC131281.2-201ENST00000520478 145 ntBASIC18.76■□□□□ 0.59
PKP2Q99959 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.76■□□□□ 0.59
PKP2Q99959 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PKP2Q99959 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.76■□□□□ 0.59
PKP2Q99959 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.76■□□□□ 0.59
PKP2Q99959 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PKP2Q99959 CROCCP3-202ENST00000420820 1947 ntBASIC18.76■□□□□ 0.59
PKP2Q99959 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PKP2Q99959 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PKP2Q99959 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PKP2Q99959 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PKP2Q99959 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PKP2Q99959 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PKP2Q99959 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PKP2Q99959 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.76■□□□□ 0.59
PKP2Q99959 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PKP2Q99959 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PKP2Q99959 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.75■□□□□ 0.59
PKP2Q99959 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PKP2Q99959 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PKP2Q99959 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PKP2Q99959 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PKP2Q99959 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PKP2Q99959 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PKP2Q99959 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PKP2Q99959 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PKP2Q99959 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.75■□□□□ 0.59
PKP2Q99959 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.75■□□□□ 0.59
PKP2Q99959 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.75■□□□□ 0.59
PKP2Q99959 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.75■□□□□ 0.59
PKP2Q99959 AC104581.1-202ENST00000635932 2618 ntBASIC18.75■□□□□ 0.59
PKP2Q99959 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PKP2Q99959 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PKP2Q99959 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PKP2Q99959 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PKP2Q99959 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.75■□□□□ 0.59
PKP2Q99959 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PKP2Q99959 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PKP2Q99959 KRT8P36-201ENST00000489121 1440 ntBASIC18.74■□□□□ 0.59
PKP2Q99959 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PKP2Q99959 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PKP2Q99959 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PKP2Q99959 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PKP2Q99959 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PKP2Q99959 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.74■□□□□ 0.59
PKP2Q99959 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.74■□□□□ 0.59
PKP2Q99959 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PKP2Q99959 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PKP2Q99959 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PKP2Q99959 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.74■□□□□ 0.59
PKP2Q99959 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.74■□□□□ 0.59
PKP2Q99959 DUX4L19-201ENST00000557448 1267 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms