Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP1S3Q96PC3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.06■□□□□ 0
AP1S3Q96PC3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP1S3Q96PC3 AL512631.2-201ENST00000604634 923 ntBASIC15.06■□□□□ 0
AP1S3Q96PC3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
AP1S3Q96PC3 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.06■□□□□ 0
AP1S3Q96PC3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP1S3Q96PC3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
AP1S3Q96PC3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
AP1S3Q96PC3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP1S3Q96PC3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.06■□□□□ 0
AP1S3Q96PC3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.06■□□□□ 0
AP1S3Q96PC3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP1S3Q96PC3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
AP1S3Q96PC3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
AP1S3Q96PC3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.06■□□□□ 0
AP1S3Q96PC3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP1S3Q96PC3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP1S3Q96PC3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP1S3Q96PC3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP1S3Q96PC3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
AP1S3Q96PC3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
AP1S3Q96PC3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
AP1S3Q96PC3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
AP1S3Q96PC3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
AP1S3Q96PC3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.05■□□□□ 0
AP1S3Q96PC3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.05■□□□□ -0
AP1S3Q96PC3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
AP1S3Q96PC3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.05■□□□□ -0
AP1S3Q96PC3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.05■□□□□ -0
AP1S3Q96PC3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.05■□□□□ -0
AP1S3Q96PC3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP1S3Q96PC3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.05■□□□□ -0
AP1S3Q96PC3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.05■□□□□ -0
AP1S3Q96PC3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP1S3Q96PC3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
AP1S3Q96PC3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.05■□□□□ -0
AP1S3Q96PC3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.05■□□□□ -0
AP1S3Q96PC3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.05■□□□□ -0
AP1S3Q96PC3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP1S3Q96PC3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP1S3Q96PC3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP1S3Q96PC3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
AP1S3Q96PC3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
AP1S3Q96PC3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.05■□□□□ -0
AP1S3Q96PC3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.05■□□□□ -0
AP1S3Q96PC3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S3Q96PC3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
AP1S3Q96PC3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP1S3Q96PC3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.04■□□□□ -0
AP1S3Q96PC3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.04■□□□□ -0
AP1S3Q96PC3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S3Q96PC3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
AP1S3Q96PC3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.04■□□□□ -0
AP1S3Q96PC3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP1S3Q96PC3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S3Q96PC3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.04■□□□□ -0
AP1S3Q96PC3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.04■□□□□ -0
AP1S3Q96PC3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S3Q96PC3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP1S3Q96PC3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP1S3Q96PC3 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.04■□□□□ -0
AP1S3Q96PC3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.04■□□□□ -0
AP1S3Q96PC3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.04■□□□□ -0
AP1S3Q96PC3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.04■□□□□ -0
AP1S3Q96PC3 SMUG1P1-201ENST00000590640 811 ntBASIC15.04■□□□□ -0
AP1S3Q96PC3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.04■□□□□ -0
AP1S3Q96PC3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.04■□□□□ -0
AP1S3Q96PC3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S3Q96PC3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
AP1S3Q96PC3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
AP1S3Q96PC3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
AP1S3Q96PC3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
AP1S3Q96PC3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
AP1S3Q96PC3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
AP1S3Q96PC3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
AP1S3Q96PC3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.04■□□□□ -0
AP1S3Q96PC3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP1S3Q96PC3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP1S3Q96PC3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
AP1S3Q96PC3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
AP1S3Q96PC3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP1S3Q96PC3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP1S3Q96PC3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
AP1S3Q96PC3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP1S3Q96PC3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.03■□□□□ -0
AP1S3Q96PC3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP1S3Q96PC3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP1S3Q96PC3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.03■□□□□ -0
AP1S3Q96PC3 AC009237.3-201ENST00000393279 1427 ntBASIC15.03■□□□□ -0
AP1S3Q96PC3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP1S3Q96PC3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP1S3Q96PC3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
AP1S3Q96PC3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP1S3Q96PC3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP1S3Q96PC3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
AP1S3Q96PC3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
AP1S3Q96PC3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
AP1S3Q96PC3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
AP1S3Q96PC3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms