Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 AC211429.1-201ENST00000415277 523 ntBASIC16.26■□□□□ 0.19
ZNF48Q96MX3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 AC027702.1-201ENST00000563810 1770 ntBASIC16.26■□□□□ 0.19
ZNF48Q96MX3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF48Q96MX3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF48Q96MX3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF48Q96MX3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF48Q96MX3 AC006128.1-201ENST00000624704 1661 ntBASIC16.24■□□□□ 0.19
ZNF48Q96MX3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ZNF48Q96MX3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF48Q96MX3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ZNF48Q96MX3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF48Q96MX3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF48Q96MX3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF48Q96MX3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.24■□□□□ 0.19
ZNF48Q96MX3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF48Q96MX3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF48Q96MX3 TSPY15P-201ENST00000457163 923 ntBASIC16.24■□□□□ 0.19
ZNF48Q96MX3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF48Q96MX3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
ZNF48Q96MX3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF48Q96MX3 BX088651.1-201ENST00000540551 451 ntBASIC16.24■□□□□ 0.19
ZNF48Q96MX3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ZNF48Q96MX3 AC113410.3-201ENST00000623366 203 ntBASIC16.24■□□□□ 0.19
ZNF48Q96MX3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.24■□□□□ 0.19
ZNF48Q96MX3 MIR2861-201ENST00000636310 90 ntBASIC16.24■□□□□ 0.19
ZNF48Q96MX3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ZNF48Q96MX3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF48Q96MX3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 KRT8P36-201ENST00000489121 1440 ntBASIC16.23■□□□□ 0.19
ZNF48Q96MX3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF48Q96MX3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 KRT17P2-201ENST00000300992 1314 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms