Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLNQ969V3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLNQ969V3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NCLNQ969V3 HLA-L-209ENST00000420110 1011 ntBASIC19.32■□□□□ 0.68
NCLNQ969V3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.32■□□□□ 0.68
NCLNQ969V3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.32■□□□□ 0.68
NCLNQ969V3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
NCLNQ969V3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.32■□□□□ 0.68
NCLNQ969V3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.32■□□□□ 0.68
NCLNQ969V3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLNQ969V3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.32■□□□□ 0.68
NCLNQ969V3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NCLNQ969V3 AL121832.2-201ENST00000610979 668 ntBASIC19.32■□□□□ 0.68
NCLNQ969V3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLNQ969V3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLNQ969V3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLNQ969V3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
NCLNQ969V3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.32■□□□□ 0.68
NCLNQ969V3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.31■□□□□ 0.68
NCLNQ969V3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.31■□□□□ 0.68
NCLNQ969V3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
NCLNQ969V3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NCLNQ969V3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCLNQ969V3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.31■□□□□ 0.68
NCLNQ969V3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NCLNQ969V3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NCLNQ969V3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCLNQ969V3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.31■□□□□ 0.68
NCLNQ969V3 GPX1P1-201ENST00000388829 606 ntBASIC19.31■□□□□ 0.68
NCLNQ969V3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NCLNQ969V3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.31■□□□□ 0.68
NCLNQ969V3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCLNQ969V3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NCLNQ969V3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NCLNQ969V3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.31■□□□□ 0.68
NCLNQ969V3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NCLNQ969V3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCLNQ969V3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCLNQ969V3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.31■□□□□ 0.68
NCLNQ969V3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCLNQ969V3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NCLNQ969V3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NCLNQ969V3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCLNQ969V3 AC083906.2-201ENST00000511578 360 ntBASIC19.3■□□□□ 0.68
NCLNQ969V3 AC069236.1-201ENST00000604339 616 ntBASIC19.3■□□□□ 0.68
NCLNQ969V3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.3■□□□□ 0.68
NCLNQ969V3 AC008694.1-202ENST00000636953 945 ntBASIC19.3■□□□□ 0.68
NCLNQ969V3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NCLNQ969V3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NCLNQ969V3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCLNQ969V3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCLNQ969V3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCLNQ969V3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NCLNQ969V3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.3■□□□□ 0.68
NCLNQ969V3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.3■□□□□ 0.68
NCLNQ969V3 AC092720.2-201ENST00000602388 1665 ntBASIC19.3■□□□□ 0.68
NCLNQ969V3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.3■□□□□ 0.68
NCLNQ969V3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCLNQ969V3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.29■□□□□ 0.68
NCLNQ969V3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NCLNQ969V3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLNQ969V3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.29■□□□□ 0.68
NCLNQ969V3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLNQ969V3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.29■□□□□ 0.68
NCLNQ969V3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.29■□□□□ 0.68
NCLNQ969V3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.29■□□□□ 0.68
NCLNQ969V3 AF201337.1-201ENST00000520239 748 ntBASIC19.29■□□□□ 0.68
NCLNQ969V3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.29■□□□□ 0.68
NCLNQ969V3 AL162412.1-201ENST00000567129 965 ntBASIC19.29■□□□□ 0.68
NCLNQ969V3 AC105036.2-201ENST00000569468 176 ntBASIC19.29■□□□□ 0.68
NCLNQ969V3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLNQ969V3 AL109923.1-201ENST00000618799 583 ntBASIC19.29■□□□□ 0.68
NCLNQ969V3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.29■□□□□ 0.68
NCLNQ969V3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLNQ969V3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NCLNQ969V3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
NCLNQ969V3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLNQ969V3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLNQ969V3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
NCLNQ969V3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLNQ969V3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLNQ969V3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLNQ969V3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NCLNQ969V3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.28■□□□□ 0.68
NCLNQ969V3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLNQ969V3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLNQ969V3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLNQ969V3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLNQ969V3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.28■□□□□ 0.68
NCLNQ969V3 AC133552.2-202ENST00000575694 574 ntBASIC19.28■□□□□ 0.68
NCLNQ969V3 AC104771.1-201ENST00000603335 964 ntBASIC19.28■□□□□ 0.68
NCLNQ969V3 AC016405.3-201ENST00000607710 860 ntBASIC19.28■□□□□ 0.68
NCLNQ969V3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NCLNQ969V3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLNQ969V3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLNQ969V3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLNQ969V3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLNQ969V3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NCLNQ969V3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NCLNQ969V3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms