Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.41■■□□□ 1.18
ATP6V0A1Q93050 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
ATP6V0A1Q93050 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
ATP6V0A1Q93050 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ATP6V0A1Q93050 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.4■■□□□ 1.18
ATP6V0A1Q93050 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ATP6V0A1Q93050 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.4■■□□□ 1.18
ATP6V0A1Q93050 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
ATP6V0A1Q93050 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
ATP6V0A1Q93050 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ATP6V0A1Q93050 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
ATP6V0A1Q93050 AP001412.1-201ENST00000608405 714 ntBASIC22.4■■□□□ 1.18
ATP6V0A1Q93050 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
ATP6V0A1Q93050 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ATP6V0A1Q93050 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ATP6V0A1Q93050 KRT8P17-201ENST00000453110 1448 ntBASIC22.4■■□□□ 1.18
ATP6V0A1Q93050 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.4■■□□□ 1.18
ATP6V0A1Q93050 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
ATP6V0A1Q93050 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ATP6V0A1Q93050 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.39■■□□□ 1.18
ATP6V0A1Q93050 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 PRKY-204ENST00000533551 1019 ntBASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 REXO1L12P-201ENST00000622156 912 ntBASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 AL049637.2-201ENST00000641778 930 ntBASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 AL135905.2-201ENST00000584934 1404 ntBASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP6V0A1Q93050 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP6V0A1Q93050 KRT17P2-201ENST00000300992 1314 ntBASIC22.38■■□□□ 1.17
ATP6V0A1Q93050 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP6V0A1Q93050 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ATP6V0A1Q93050 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
ATP6V0A1Q93050 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
ATP6V0A1Q93050 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
ATP6V0A1Q93050 ECEL1P3-201ENST00000427961 737 ntBASIC22.38■■□□□ 1.17
ATP6V0A1Q93050 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ATP6V0A1Q93050 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.38■■□□□ 1.17
ATP6V0A1Q93050 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP6V0A1Q93050 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP6V0A1Q93050 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP6V0A1Q93050 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.38■■□□□ 1.17
ATP6V0A1Q93050 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
ATP6V0A1Q93050 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.37■■□□□ 1.17
ATP6V0A1Q93050 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP6V0A1Q93050 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP6V0A1Q93050 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.37■■□□□ 1.17
ATP6V0A1Q93050 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.37■■□□□ 1.17
ATP6V0A1Q93050 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.37■■□□□ 1.17
ATP6V0A1Q93050 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.37■■□□□ 1.17
ATP6V0A1Q93050 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.37■■□□□ 1.17
ATP6V0A1Q93050 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.37■■□□□ 1.17
ATP6V0A1Q93050 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP6V0A1Q93050 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
ATP6V0A1Q93050 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP6V0A1Q93050 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP6V0A1Q93050 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ATP6V0A1Q93050 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.36■■□□□ 1.17
ATP6V0A1Q93050 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
ATP6V0A1Q93050 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
ATP6V0A1Q93050 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.36■■□□□ 1.17
ATP6V0A1Q93050 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP6V0A1Q93050 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V0A1Q93050 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V0A1Q93050 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.35■■□□□ 1.17
ATP6V0A1Q93050 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
ATP6V0A1Q93050 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V0A1Q93050 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V0A1Q93050 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V0A1Q93050 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.35■■□□□ 1.17
ATP6V0A1Q93050 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V0A1Q93050 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V0A1Q93050 AC211429.1-201ENST00000415277 523 ntBASIC22.35■■□□□ 1.17
ATP6V0A1Q93050 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22.35■■□□□ 1.17
ATP6V0A1Q93050 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.35■■□□□ 1.17
ATP6V0A1Q93050 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V0A1Q93050 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.35■■□□□ 1.17
ATP6V0A1Q93050 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V0A1Q93050 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V0A1Q93050 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V0A1Q93050 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V0A1Q93050 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATP6V0A1Q93050 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
ATP6V0A1Q93050 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.34■■□□□ 1.17
ATP6V0A1Q93050 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.34■■□□□ 1.17
ATP6V0A1Q93050 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATP6V0A1Q93050 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms