Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AP000525.1-201ENST00000608286 694 ntBASIC18.09■□□□□ 0.49
RP1L1Q8IWN7 AC233723.2-201ENST00000623798 2106 ntBASIC18.09■□□□□ 0.49
RP1L1Q8IWN7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.09■□□□□ 0.49
RP1L1Q8IWN7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RP1L1Q8IWN7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RP1L1Q8IWN7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RP1L1Q8IWN7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.09■□□□□ 0.49
RP1L1Q8IWN7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RP1L1Q8IWN7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RP1L1Q8IWN7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RP1L1Q8IWN7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RP1L1Q8IWN7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RP1L1Q8IWN7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.09■□□□□ 0.49
RP1L1Q8IWN7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.09■□□□□ 0.49
RP1L1Q8IWN7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.09■□□□□ 0.49
RP1L1Q8IWN7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RP1L1Q8IWN7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.09■□□□□ 0.49
RP1L1Q8IWN7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.09■□□□□ 0.49
RP1L1Q8IWN7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RP1L1Q8IWN7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RP1L1Q8IWN7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RP1L1Q8IWN7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RP1L1Q8IWN7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RP1L1Q8IWN7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RP1L1Q8IWN7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RP1L1Q8IWN7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.08■□□□□ 0.49
RP1L1Q8IWN7 AL390719.1-204ENST00000412397 1219 ntBASIC18.08■□□□□ 0.49
RP1L1Q8IWN7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RP1L1Q8IWN7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RP1L1Q8IWN7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RP1L1Q8IWN7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
RP1L1Q8IWN7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RP1L1Q8IWN7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.08■□□□□ 0.48
RP1L1Q8IWN7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.08■□□□□ 0.48
RP1L1Q8IWN7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.08■□□□□ 0.48
RP1L1Q8IWN7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
RP1L1Q8IWN7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RP1L1Q8IWN7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
RP1L1Q8IWN7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.07■□□□□ 0.48
RP1L1Q8IWN7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RP1L1Q8IWN7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RP1L1Q8IWN7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RP1L1Q8IWN7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RP1L1Q8IWN7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RP1L1Q8IWN7 KSR1P1-201ENST00000446298 240 ntBASIC18.07■□□□□ 0.48
RP1L1Q8IWN7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.07■□□□□ 0.48
RP1L1Q8IWN7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.07■□□□□ 0.48
RP1L1Q8IWN7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.07■□□□□ 0.48
RP1L1Q8IWN7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RP1L1Q8IWN7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RP1L1Q8IWN7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RP1L1Q8IWN7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RP1L1Q8IWN7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RP1L1Q8IWN7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RP1L1Q8IWN7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RP1L1Q8IWN7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.06■□□□□ 0.48
RP1L1Q8IWN7 AC027702.1-201ENST00000563810 1770 ntBASIC18.05■□□□□ 0.48
RP1L1Q8IWN7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RP1L1Q8IWN7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RP1L1Q8IWN7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RP1L1Q8IWN7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RP1L1Q8IWN7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RP1L1Q8IWN7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.05■□□□□ 0.48
RP1L1Q8IWN7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RP1L1Q8IWN7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RP1L1Q8IWN7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RP1L1Q8IWN7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RP1L1Q8IWN7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RP1L1Q8IWN7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RP1L1Q8IWN7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.05■□□□□ 0.48
RP1L1Q8IWN7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RP1L1Q8IWN7 AC087388.1-201ENST00000571370 1112 ntBASIC18.05■□□□□ 0.48
RP1L1Q8IWN7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms